Macrobrachium rosenbergii (giant freshwater prawn): 136832246
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Entry
136832246 CDS
T10429
Name
(RefSeq) nephrin-like isoform X1
KO
K24496
nephrin
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136832246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mrj04990
]
136832246
Domain-containing proteins not elsewhere classified [BR:
mrj04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
136832246
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
C1-set
C2-set_3
Ig_VEGFR-1-like_5th
fn3
VEGFR1-3_N_Ig-like
Ig_5
Ig_6
Big_7
Marek_A
YchO_Ig
TM_ErbB1
FN3_DSCAM-DSCAML_C
Protocadherin
Motif
Other DBs
NCBI-GeneID:
136832246
NCBI-ProteinID:
XP_066949211
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All DBs
Position
49:complement(32201781..32321422)
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AA seq
1334 aa
AA seq
DB search
MSKRNLELFLLYWISALHLGWSLPQSFRVAPQNVEVVAGNDVTLRCEVENQQGKAQWTKD
GFALGFNRSIPGFPRYSVVGDESRGIHNLLITEVEIGDDGEYQCQVTPPSSGGGKAIRHA
ANLTVLLPPTSIEMVDHEPNAKITVKAGDSVTLQCAIRNAKPVSKVAWYRGNDPLRLDSQ
TDTKETSESDQNLKTLKTTITFRPTHTDNGVEYSCRAVHPALEDSNTQMVAKVRLDVHYE
PGAPEITGYTEGEIVRAGDRKTLVCRARGGNPLPEVFWYKNGAQIDKNFNKHRNYAVNEY
EFEVEASDNLAKYECHVMNSMTQQPKKAEIQLRVNFAASQVTISGPSEVKVGDIIAVSCI
AENSNPPADVNLVINGQTPPGATSSTQKVDNGGWNTITNLTSYEVRPIDSDLTVNCYALN
QALGSTKIDTMVISVLRPPEPPTILGYEPGRRLRKDDPQRLTCISNGGNPLATLKWFKGT
QELQADTRHEGGSAISELNISLEESDNGAEYRCEATNPASPTPLINSTILHVMFPPSGVK
VKARPRQIKADSQATLICESASSNPMANVTWWRSGFEVDHGDIEVKPGQYGGHTTKHSVR
INVTSQDDGAVFTCQADNRVGPTTHDAVTLSVRFPPVWKSSPKDSMDVSEGENVVVNVSA
VGNPNSVTYIWKRYDEVVMSGSFLNISSVTKDQAGFYTVEATNEEGTSVKNISINVKYAP
TIMEVSGGRNLTQGETVTLLCKADASPSPEIKWQREGYNFSKAHHEKHPTKDLMGLTIKN
VTFEDTGIFTCVAKNGIGEPATANATIVVKHKPIIDQSPRFQKAAAEAGGNARLICRASG
APYVSFTWFTRDNTPIEKAIYARFDNRYLVEEPKLIDGLVTYESVLLVKNVSNKDYGFFE
CQARNPLGSSRTAIHLDGTSKPDPPMDLKVLNFTHDSVTLIWTPGFDGGLIQNYRVRFAI
AGSTRYQYADAYPENVTIFTVYGLTLGTTYSFSVLAYNSKGESEYTKDEVQATTESSPPL
TEVERAISRVLAEKADLPRVVTLSVSTVGGLLVVVNVILVACVLRRRRRRKGSHASSDKG
SSKSTTIEMYAPSSYTGTVTGETLSSISEKSRESYAHEDSADEYEAEAARVTAASTYLIE
QLEPPPQYATRPPPHILPPPPSHNDLNIDDGYDDIRRNQYNAALDRASGYGTLGRRNNTT
DHYNITNAEGGHYSLQTHRYNTYQPPNHTTSLTAHTHAHNQNTDSLRRNPPSKLHFPKDY
IRNGSMNIPVTGSAAPSSAAPGGGGGGGLGGKFPNKPQSPTRTHPPHTPMLTTFASDPTQ
PTSGVPLEHRGHLV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagaaacctggaactattcctactctactggatttcagctctgcatttagga
tggtcattaccccagtccttccgcgtggctccgcagaacgtggaggtggtggccggaaat
gacgtcactcttcgttgcgaggtggaaaatcaacaagggaaagcgcagtggacaaaagat
ggattcgctctagggttcaaccgctcgattcccggcttcccgagatacagcgtcgtggga
gacgaatcgagaggaatccacaatctgttgataactgaagtagagatcggggatgacggg
gaataccagtgccaggtgaccccacccagcagtggagggggcaaagctattcgacatgca
gccaatctcaccgtccttttaccgccaacaagcatagaaatggtggaccacgaacccaac
gccaagataaccgtcaaagctggagactccgtgactcttcagtgcgcgataagaaacgct
aagccggtctccaaggtggcttggtatagaggaaatgatccattgcggttggattcgcag
accgacacgaaagaaacgtccgaaagcgaccaaaatttgaaaactctgaagacgacgata
acctttcgtccaacgcatacggacaatggggtggagtacagttgtcgcgccgtccatcca
gctcttgaagactctaacacccagatggtagctaaagtcaggctagatgttcattacgaa
ccaggcgcccctgagatcacgggctacaccgaaggggaaatcgtgagggcgggggacagg
aagacgctggtgtgcagggcgcggggcggaaaccccctcccggaagtcttctggtacaag
aacggcgcccagatcgacaagaacttcaacaagcacaggaactacgccgtcaacgagtac
gagttcgaggtcgaggcgtcggacaacctggccaaatacgagtgccacgtcatgaattcg
atgacgcagcagcccaagaaagccgagattcagctgagggtgaacttcgccgcctcacaa
gtgaccatttccggcccgagcgaagtgaaagtgggagacatcatcgccgtgagctgcatc
gccgaaaattcgaaccccccagcggacgtcaatctggttatcaacggacagacgcctccc
ggggccacgtcctcgacacagaaggttgataatggagggtggaacaccattacaaacctt
accagttacgaagtgcgtcctatagattccgacctgacagtcaactgctatgctctgaac
caggctctcggatcaaccaagattgacaccatggttataagtgtcttacgacctcccgaa
ccgcccaccatcttgggatacgaaccaggtcgaaggcttcgaaaagacgaccctcaaagg
ttgacctgcataagcaacggcggcaatcctctggcgacgctgaaatggttcaagggcacg
caggaactccaggcggatacccgccacgaaggcggttcggccatctccgagctaaacatc
tctctggaggagtccgacaacggagccgagtacaggtgcgaagcgacgaatcctgcttcc
ccgacgccgcttataaactcgacgatacttcatgttatgtttcccccttcaggagtgaag
gtgaaggctcgccctcggcagatcaaggccgactcacaggcgacgctcatttgcgaatca
gcgtccagcaacccgatggcgaatgtcacctggtggaggagcggtttcgaggtcgaccac
ggggacattgaggtcaagcctggacaatacggaggacacaccaccaaacattcggtgcga
atcaatgtaacatcccaagatgacggggctgtcttcacctgccaagccgataacagagtt
ggaccgacgactcacgatgctgtgacgctgagtgtcagattccctccagtctggaaatcc
agccccaaggactccatggacgtatccgaaggcgagaacgtggtcgtgaacgtcagcgcc
gtaggaaatcccaacagcgtcacctacatctggaaacgctacgatgaggtcgtcatgtct
gggagcttcctgaacatatcgtccgtgacaaaggaccaggccgggttttacacagtggaa
gccaccaacgaagaagggacctcggtcaagaatatttccatcaacgtcaagtatgccccg
accatcatggaagtctccgggggtcggaatctcacccaaggggagaccgtgacactcctt
tgcaaggcggacgcgtcgccctcgccggaaatcaagtggcagagggaaggctacaacttc
tccaaggctcaccatgaaaagcatcccacgaaggacctcatggggctgaccattaaaaat
gtgactttcgaggacactggcatcttcacctgcgtggccaagaatggcatcggagagcca
gcgacagctaatgccactatcgtcgtcaaacacaaaccgatcatcgaccagtccccgagg
tttcagaaagcagctgcagaggcaggagggaacgcgcgtcttatctgccgggcttcgggg
gcgccttacgtctctttcacgtggttcaccagagacaacacccctatcgagaaggccatc
tacgctcgcttcgataacagatatctcgtcgaggagccaaagctcatagacggcttagtg
acctacgagagcgtcctgctggtgaagaacgtctccaacaaagattacggcttcttcgag
tgccaggctcgcaatcccctgggttcctcccgtacggccatacacttggacggtacgagc
aagccggatccacctatggatttaaaggttctgaacttcacccacgattcagtaaccctt
atttggacacccggatttgacggaggtttgattcagaattaccgagttcgatttgccatt
gctggttcaaccaggtaccagtatgccgatgcatatcccgagaacgtcacgatcttcacg
gtatacggactcaccttgggcaccacttactcgttcagcgtcctcgcatacaactccaag
ggcgagtcggagtatacgaaggacgaggttcaggctaccacggagagttctccgcccctg
accgaggtcgaacgcgccatctcccgagtcctagcagaaaaggccgacctcccaagggtg
gtcacgctctctgtgtcaactgtaggagggctgttggtggtcgtgaacgtgatcctcgtg
gcgtgcgtgctacgccgacggcgtcgccgaaagggcagccacgcctcgtcagacaagggc
tccagcaagagcaccaccatcgagatgtatgccccgtcgtcctacactggcactgtcacg
ggcgagaccctgtcgtctatctctgagaagtcccgcgagagctacgcccatgaggactca
gccgatgagtatgaggccgaagcagcgagggtgacagctgccagcacatacctcatagag
cagctggaaccccctccacaatacgccacgcgacccccaccccacatcctcccaccccca
ccctcccacaatgacctcaacatagatgatggatatgatgacatcaggaggaatcaatat
aatgcggcgctagatcgagccagcggatatggaaccctgggcagaaggaataacacgacg
gatcattacaacataacgaacgccgagggcggccactactcgctccagacccatcgttac
aacacgtatcagccgcccaaccacaccacttccctcacggcccacacccacgcccacaac
caaaacacggactccctcaggcgaaacccaccctcgaagcttcacttcccgaaagactac
attcgaaatgggtccatgaacatccccgtgacgggaagtgcagctccttcgtctgctgct
cccggaggagggggaggaggaggcctgggcgggaaattccccaacaagccccagtccccg
acgcgcactcacccacctcacacgcccatgctcacgactttcgcctccgatccaacccag
cccacctccggagtccctctcgaacatcggggccacctagtgtga
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