Macrobrachium rosenbergii (giant freshwater prawn): 136841413
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Entry
136841413 CDS
T10429
Symbol
IntS1
Name
(RefSeq) LOW QUALITY PROTEIN: integrator complex subunit 1
KO
K13138
integrator complex subunit 1
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrj03041
]
136841413 (IntS1)
Spliceosome [BR:
mrj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
136841413 (IntS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Ubiquitin_6
Motif
Other DBs
NCBI-GeneID:
136841413
NCBI-ProteinID:
XP_066964438
LinkDB
All DBs
Position
9:8926604..8944342
Genome browser
AA seq
2095 aa
AA seq
DB search
MDRKGPRSAKPKNVPLPGNLITLGKNPGRTDTQIDKASAHSTGYSAGKSTGPSGERGRDG
GAGSSGLLGKKPKPGLGGASAVGRPGVSKQIAGDNMVNLLSEEWENVAAEVDPNDLIPFI
EAGEECGDAGNSEMYLCGAVKSLRAQRTKPDSLLCFSLMYLAKVKPYLFSRSEMVVEXFC
SLLKRDHSMTYKTKGNAAVSVLAANILLAAFQDEKSWPDIFVRVYIEDSLGERIWVDHED
CKGFVDNIATGFKTKLPPKNLLYPDLGMGSRQDCPSPPVSVGSGGADSGDGDSELSLECK
ESLDVSVTNRYAGILVDVEEMVMEAVQHQLGVRHQSPDAVARNFIRFLSSVCGIPEVRRH
VAPRLEMWLQSPKLQRPATELLMSLCLNCNTHSQLDIECISHVIRLRLKHKPLINQYMSC
LRELLAAHPDNIPSVMKHTLYNELSQARNPSNMAILSVIFQFAPEHAAIILAEEFQELLC
NKEDFLRALRALLREIVRALRHDMQFQKFCIGLMKDRKDQSFRDNFEFKERMFHSITDLI
VLTLFVAISPQVRESAAQMYRGEQRDLDPVRRYQELVASVQRDALSWLYRVVPKCYNPSK
EEYTRCLHKILMFEGAEVYFNKDNWPTENDRPLYFRLTSEIPVKQETLTRLLMIAVMKDQ
WMKSQDLLELVDKLVKRATALHNDELEVLHIEDTKIIELIFNLCPYIPPENSPLPQGYRP
PKTAIANLYWKAWMILLLITAHNPTVFGLLAWESYPTLRTLMEMCITNSFVFPPPTLATG
EKGEEMSSQEIHLCALERQQILDFESHLAQKTITEQNSLLLSQLITMEPTGPARKPPAIV
LDQLKALNTSHKIGHLLCRSRSPDFLVDIIQRQGASQSMPWLAELVQSSEGAFSVLPVQC
LCEFLLSEAGTSGSDVATKHHQLLQHLRSLLRAPRQEDGVSVEILEYFLRRLSSQQAAAR
TQAVRGLQLVVAPMNDAMEIDSDSHAPHAWLLQYLPNLPGFDLVQGVASQALRAACQIET
DPQAVSAYIRFLAVHTRDDPLQDQAELVQDMAQLIVERFTMISAILPMPDRPNQPFNQSH
STLKALLIIFINYMRKVRLPPRESFTWSESQDQVRIQWASGEQAVMHILVVHAMVILLTH
GPDNSPDLFHELLTTWFPEQEEMPQAFLVDTSEEALLLPDWLKLKMIRSTVPQLVDAALK
DLEPSQLVLFIQSFGIPVASMTKLLCALDVAVNHSEEAVAAAVLDKSHKTYMAQLVEVQH
QRGAKGGHAFAATLGERDDMDVVGERPPQVRPLVTPLKISQALHTELSKSEVQSFVLQCF
TNDILHRDHKKQVQDTMRVLQRHFTREISRQDPESPYISEFLSSLTAIVQSPQHARSFVT
GLHQHYIYSASLFRLLHNMHSKKCCEKLYSMTCQLVAIILRMAPDLKSPLTNVLETFNIE
ELQFQEAKKKEPKAEVDITSSETILLHLSCLPPSQLEKEICSVVSSAMKGGKMTPVVEAL
TQLLLSGVSVKQEGDVQKGNNPPSALLLDWLQVLDPELEKGSNQLQQILLFKKRAGNKQK
EGSYSQAYLLAAFTHQARWDTLEHCVRSLLRVHSTTLDPAAVLGFVWAVLHVPKLWQGRE
RRTPRHAPQEALLTFSTSEIVHLAQYMIADCQTALEAGRGITSLEKHLPLLLHSLNNSSE
AMQVLAEHLSGVSQNTSSSGQAAGHLLYHLYLRMPRIISYLPAGTMTRVVMSGAKGGRAQ
ESGADVALHTLLTMLASPQPGREFRRRMCDIEAAVRKQAVSHPLIVLRHLPLLAASLKGT
NHLQLSALRSSNYLELFSMILGVLELLQPLLFAPQHHEALTPLLDSFMALFTSVHELGHL
LARFSHLLMVWVGCQGGPAATYLCAHSSLLATLQTHHPDIAALRSLAAIAAARGMDQPKE
STSNQQTNIDLSLSTGCFQGPIPPPFIMAQVNEMQARLEGPGLPEEQLEILKKISELADR
WVSAVLPSYTHIFCTGISSENKGLRMMCWELISRLLHQRPALGGRIGQAVLAALKSEDSA
VVETALEHLPDVILLLHDQAPELLCAAFVSALTSSASASASLSETLCLLHLHTGS
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaaaagggccgagaagtgccaagccgaagaacgtgcccctgcctggcaactta
atcactttgggcaaaaatccgggccggacagatacccagatcgacaaggcgtccgcccat
tcgacggggtattccgccgggaagtcgacaggtccatctggagagcgtggaagagatggt
ggtgcaggttcatcagggttactcggaaaaaaacccaagccaggcttgggaggtgcgtcc
gcagttggacgcccgggtgtttcaaaacaaattgccggtgataatatggtcaacttgctg
agtgaagaatgggaaaatgttgctgcagaggtcgacccaaatgatttgatacccttcata
gaagcaggagaggagtgtggcgatgctggtaattcagagatgtatctgtgtggagctgtc
aagagtctcagagcgcagagaaccaaaccagatagtttgctctgcttttcccttatgtac
ttagcaaaagtcaagccataccttttcagcagatctgaaatggttgtggagngcttttgc
tcacttctcaaaagggaccattcaatgacttacaaaacaaagggtaatgctgctgtctca
gttctggctgccaacattctgctggcagcctttcaagatgaaaagtcctggccagacata
ttcgttcgcgtatatattgaagattctctcggtgagagaatttgggtagaccacgaagac
tgcaaaggatttgtagataatattgccacaggtttcaaaaccaagttaccacctaagaat
ctgttgtatcctgatctgggaatgggtagccgtcaagattgtccatctcctcctgtgtca
gtaggttcggggggagccgattctggcgatggtgactccgaattgtctttagagtgcaaa
gagagcttagatgtaagtgttacgaatcgttatgcaggcatattggtagatgttgaagag
atggtaatggaagcagtacaacaccagctaggagttagacatcagagtcctgatgctgtt
gcccgcaatttcattcgatttttgtcgtcggtatgtggcattcctgaagtacgtaggcac
gttgccccaagacttgagatgtggctccaaagtcccaagctacaaagaccagctacggag
ttgctcatgtcgctttgtttgaattgtaatactcactctcagctggatattgagtgcatt
agtcatgtcataaggctgagattgaagcataagccacttatcaatcagtatatgtcttgt
ttgagggaactactagctgcccaccctgataatattccttctgtaatgaagcatacactc
tataatgaactgtctcaggctagaaatccgagcaatatggcaatcctctcagtcatattt
caatttgcccccgagcatgctgccataatacttgcagaagaattccaagaacttctttgc
aacaaggaagactttcttagggccctgagagctctcttgcgagaaattgtcagggcgctg
aggcatgacatgcagttccagaagttttgtataggtctgatgaaagatcgaaaagatcag
tcatttcgtgataactttgagttcaaagagaggatgtttcacagcattactgatctcatt
gtgcttactctctttgtggccatctccccacaagtaagggagagtgcagctcagatgtat
agaggggaacagagagacttggatcccgtcagaaggtaccaagaattggtggcttctgtc
cagcgtgatgccctttcgtggttgtatagagtcgtcccgaaatgctacaatcccagtaaa
gaagaatacacacgatgcctccacaagatactgatgtttgaaggagctgaggtatatttc
aacaaagataactggccgactgaaaatgaccgtcctttatacttcaggttaacttcggaa
atacccgtcaaacaagaaaccctgacaagacttctcatgatagcagtgatgaaagatcag
tggatgaagtctcaagacttactggagttagtggacaaacttgtgaaaagagccacagcc
cttcataatgatgaattggaggtgttgcacatagaggacacaaaaatcatagaactcata
ttcaacttatgcccgtatattccccctgagaactcacctctgccgcaggggtacagacca
ccaaaaactgctattgctaacttgtattggaaagcttggatgatacttttgcttataact
gctcacaatcctacagtatttggattacttgcatgggagtcttatccaactttaagaaca
ctgatggaaatgtgcatcactaattcttttgtcttccctccacctacattagccactggg
gaaaagggagaggaaatgtcttcacaagagattcatttatgcgcacttgaaaggcagcag
attctggattttgagtcccatttggctcaaaagaccatcactgaacaaaacagcctcctc
ttgagccagcttatcacaatggaaccgaccggtccagctcgcaaacctccggcgatagtt
cttgatcagttaaaagctcttaatacctcccataagatcgggcatcttttgtgccgtagt
cggtcacctgactttttagttgatatcattcagaggcagggagcttcgcagagtatgcct
tggttggcagagttggtccagagcagtgaaggagcattctcagtattgccagttcagtgc
ttgtgtgaatttttgcttagtgaagcgggcacctcaggtagtgatgttgcaaccaaacac
catcagttattgcagcacttgaggtcgttgttgcgagctccacggcaagaagacggagtt
agtgtggaaatcttggaatattttcttaggaggttgagttcacaacaagcagcagctcgt
acacaagcagttcgaggtttacagctggtcgtcgcaccaatgaacgacgccatggaaata
gattctgactcccatgctccacatgcctggctgctacagtacttaccaaacttgcctggg
ttcgatttggtgcaaggggtggccagccaggccctccgtgcggcgtgccagatcgagacc
gatccgcaagcggttagtgcttacatccgatttctggctgtgcacacgcgagacgatcca
cttcaagatcaggctgagcttgtgcaggacatggctcagctgatagtagagcgtttcaca
atgatatcagccattctgcccatgccagatagacccaatcaacctttcaaccagtcacac
agtacacttaaagccttgctcatcattttcataaattacatgcgcaaagtaaggttgcct
cccagagaatcattcacttggtcagaaagtcaggatcaagttcgcattcagtgggcttcc
ggggaacaagcagtgatgcatatacttgttgtccatgccatggtgattctcttaactcac
ggaccagacaacagtccagacttgttccacgaactactaacgacttggtttcccgagcag
gaggaaatgccccaagcatttttggttgatacatctgaagaagcgttacttctcccagac
tggctcaagttgaagatgatcaggtcaactgtcccccaacttgttgacgctgcattgaag
gatttggagccatcacagctcgtgcttttcattcagtcctttggaattcctgtcgcgagc
atgacgaagctcctttgtgccctggacgttgccgtcaaccacagcgaagaagcagttgcc
gcagcagtcttagacaaaagccacaagacgtacatggctcagcttgtcgaggtacaacat
cagcgaggggccaaaggagggcatgcattcgctgctaccctcggggagcgagatgacatg
gacgtggtgggagagcgacctcctcaagtacggcctctcgtcaccccactgaagatatct
caggctcttcacactgaattgagtaaaagtgaggtgcaatcctttgttcttcagtgcttc
acgaatgatattcttcacagagaccacaaaaagcaggttcaagacacaatgagagttttg
caacgtcactttaccagggagatcagtcgacaagatcccgaaagtccgtacatcagcgaa
ttcctgagcagtctcactgcaatcgttcagtccccacagcatgctcggagctttgttacg
ggactgcatcaacactacatttattctgcctccctctttcgcctcctacacaacatgcac
agcaagaaatgctgcgaaaagctgtacagcatgacttgccagctggttgccattatcttg
aggatggctccagatttaaagtcgccgctgacgaacgttctcgaaaccttcaatattgag
gaactgcaatttcaggaggcgaaaaagaaagagccaaaggcagaagttgatataacgtcg
tcggagactattttactacatctctcttgtttgcccccaagtcagttagagaaagaaatc
tgcagtgtggtcagctctgcaatgaaaggagggaaaatgacaccggttgttgaagcgctg
actcagttactcttgtcgggcgtttctgtaaaacaggaaggggatgtacaaaagggaaac
aatcccccctctgcactgttattagattggttgcaagttcttgaccccgagttagaaaaa
gggtcaaaccagttgcagcaaattttactcttcaagaaacgagctgggaataagcaaaag
gaagggagctatagccaagcctacctccttgcagcattcacgcatcaggcacgatgggac
acccttgagcactgcgtgcgttctttgttgcgcgtgcacagcacaacgcttgaccctgct
gctgttcttggatttgtttgggcagtgttgcatgtgccaaaactttggcagggtagagaa
cgcagaacgcctcgccatgctccccaagaggcccttttaacattcagtacttctgaaata
gttcatttagcccagtatatgattgccgattgtcaaacagcgctcgaagctggacgtggt
ataaccagtttagaaaagcatttaccattactgcttcatagcttaaacaattcttcagag
gcaatgcaggttttggcagagcatttgtcgggagtttctcagaataccagttcaagtggt
caagcagctggacatctactgtatcatctttatttgcgaatgcctcgaattatatcatat
ttaccagcaggcacaatgacgagagttgtgatgtctggggctaaaggaggtcgagctcag
gagagtggtgcagatgttgcccttcacacacttcttacaatgcttgcctctccccagcca
ggccgagaattccggaggcgaatgtgtgatatagaggcagcagttcgcaagcaagctgta
tcacacccactgatcgtcctgcgtcacctgccattattagcagcgtcactgaaaggcacc
aatcatttgcagttgtcagcattgcggtcgagcaattaccttgaattgttctcaatgata
ttgggagttttggaactcctacagccactgctgtttgctccacaacatcacgaagcattg
actcctttgctggacagtttcatggcattattcacatccgttcatgagctgggacatctt
cttgcccgtttttctcatctgttgatggtgtgggttggatgtcaggggggtccagctgcg
acatacctgtgtgcgcattccagcctgttagctactctgcagactcatcaccctgatatt
gcagccctacgatcattggctgcaattgcagctgcccgtgggatggaccagcccaaggag
tcaacttcaaatcagcagactaacattgatctaagtttgtcgactggatgttttcagggc
ccaatacccccaccttttattatggcacaagtgaatgaaatgcaagcaaggcttgaaggt
ccaggactgcccgaagaacaactagaaatcctgaagaagatcagtgaattagccgatcgt
tgggtcagcgcagttttaccgtcgtacacgcatatattttgcactggcatatccagcgaa
aacaaaggtttgcgtatgatgtgttgggagctgatatcacgcctgctgcaccagcgacct
gctctgggcggccgcattggtcaggctgtcctcgctgctctgaagtctgaagatagtgcc
gtggtggagactgctctagaacatctccccgatgtgattttgttgctgcacgaccaggca
ccagaactgctttgcgctgcctttgtctcggcgttaacgtcgtctgctagtgcatcggct
tctctgagcgaaactttatgtttgttacatttgcatactgggtcttag
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integrated database retrieval system
