Macrobrachium rosenbergii (giant freshwater prawn): 136850502
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Entry
136850502 CDS
T10429
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj04120
Ubiquitin mediated proteolysis
mrj04140
Autophagy - animal
mrj04144
Endocytosis
mrj04517
IgSF CAM signaling
mrj04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136850502
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136850502
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136850502
04140 Autophagy - animal
136850502
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
136850502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrj04131
]
136850502
04121 Ubiquitin system [BR:
mrj04121
]
136850502
Enzymes [BR:
mrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136850502
Membrane trafficking [BR:
mrj04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
136850502
Ubiquitin system [BR:
mrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
136850502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
Sina_ZnF
zf-TRAF_2
zf-RING_6
HR1_TOCA
zf-RING_11
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
136850502
NCBI-ProteinID:
XP_066980172
LinkDB
All DBs
Position
22:complement(85990..122665)
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AA seq
564 aa
AA seq
DB search
MEGSDGSSITLISRQEGFDYDFVPPLDSKYECAICLLGLRSPMQTTCGHRFCKDCIFNCL
SESSSRCPVDNTPLLESDLFADSCAEREILQLKVKCPNHALGCSTVVDLMYIEHHTQACS
CQPVMCPNECSATVLQKELEQHLTSQCILRVTRCALCDQPFTFNQEQLHLLSCSRVTVTC
EMCGAMMPRGEVPSHTTESCPRVVVACTFAEHGCHHKMTRSDLDQHMEQAIQYHLQLLSS
ANKKMNAFVSDLSRTVGLIQSPYGNFSRQPSLRSQMSATSPIPENHSSPSQHDRNLEKSF
GAYGGTISLNDRSSLTPQSDELGNEINKLELQLNNLSASETKSGSKIPNTITHQEIILRD
VSEKTVDLNQRMLEETIKLSNLSKRIEEVDAMVEVQLADVSGKFCNGEYVWKIKHFSHLC
VELQNKPGRVLHSPPFYTSQFGYKFCLRTNITWKSNEYFFTLFIHSMQGENDDFLEWPFS
GEITLSILDCGPTAPKKHITESMVSKPDLQAFQRPMVSRNPKGFGYTEFVPLAKLLKSEG
GSYINSDVLCIRAIVSPKAPKSSS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcggacgggagttcgataaccctgatatctaggcaagaggggtttgattac
gacttcgtgccccccttagatagcaagtatgagtgtgccatatgtctcttaggcctcaga
tctccaatgcagacaacctgtgggcaccgattttgtaaagactgcatcttcaattgccta
agtgagagcagcagtcggtgtcctgttgacaatacaccactgttggagagtgacttgttt
gctgattcttgtgctgaaagagaaatactacagcttaaagtaaagtgtccaaaccatgca
cttggttgttcaacagtggtagatctcatgtacatagaacatcacacacaggcatgttcc
tgtcagccggtgatgtgccctaatgagtgttcagcaacagttctgcaaaaggaacttgaa
cagcacctcacatcgcagtgcatcttgcgggttaccaggtgtgcactgtgtgaccagcct
ttcacttttaatcaagagcagctccatctcttgagttgttcgcgggtgactgtgacgtgc
gagatgtgtggagctatgatgccccgaggtgaagtgccatcccataccacagaatcctgt
cctagagtcgtagttgcctgtacatttgcagaacatggatgccatcataaaatgacaaga
tctgaccttgatcagcatatggaacaagcaatccagtaccatctccagcttctttcatca
gccaacaaaaagatgaatgcatttgtttctgacttaagccgaacagtaggactcattcag
tctccttatggaaactttagccggcaaccaagtcttcgaagccagatgtcagcaacttcg
cccatacctgaaaatcattcaagcccatcacagcatgacagaaatcttgagaaatctttt
ggtgcttatggaggaactattagtctcaatgatagatcatcattaactccacagagtgat
gaattgggaaatgaaatcaataagctggagctccagttaaacaatctaagtgcgagtgaa
acaaagagtgggtctaaaattccaaacactattactcatcaggaaatcattttacgggat
gttagtgaaaagacagtagacttaaatcagaggatgttagaggaaactataaagttaagc
aatctgagtaagagaattgaggaagttgatgctatggtagaagttcagttagcagatgtg
agtggtaaattttgtaatggagagtatgtctggaaaatcaagcatttctctcatttgtgt
gtagagcttcaaaataaaccaggcagggtgctccacagtccacctttttacacatcacaa
tttggatataaattctgtttacgtactaatatcacgtggaagtctaatgaatactttttt
actttgttcatacactcaatgcaaggagaaaatgatgactttttagaatggccttttagt
ggggaaataactctctcaattctggattgtggtcccactgcaccaaaaaaacacattacg
gaatccatggtaagcaagccagatctgcaagcatttcagcgacccatggtatcaagaaat
cctaaaggttttggttacactgaatttgtacccttggccaagttactgaaatctgaaggg
ggaagttacatcaacagtgatgttctgtgtatccgtgcaattgtttctccaaaagcacca
aaatcatcaagttga
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