KEGG   Macrobrachium rosenbergii (giant freshwater prawn): 136851259
Entry
136851259         CDS       T10429                                 
Symbol
Roc1a
Name
(RefSeq) RING-box protein 1A
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
mrj  Macrobrachium rosenbergii (giant freshwater prawn)
Pathway
mrj03420  Nucleotide excision repair
mrj04120  Ubiquitin mediated proteolysis
mrj04141  Protein processing in endoplasmic reticulum
mrj04310  Wnt signaling pathway
mrj04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:mrj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    136851259 (Roc1a)
   04120 Ubiquitin mediated proteolysis
    136851259 (Roc1a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    136851259 (Roc1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    136851259 (Roc1a)
   04350 TGF-beta signaling pathway
    136851259 (Roc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mrj04121]
    136851259 (Roc1a)
   03400 DNA repair and recombination proteins [BR:mrj03400]
    136851259 (Roc1a)
Enzymes [BR:mrj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     136851259 (Roc1a)
Ubiquitin system [BR:mrj04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   136851259 (Roc1a)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     136851259 (Roc1a)
   Cul2 complex
     136851259 (Roc1a)
   Cul3 complex
     136851259 (Roc1a)
   Cul4 complex
     136851259 (Roc1a)
   Cul7 complex
     136851259 (Roc1a)
   Cul8 complex
     136851259 (Roc1a)
   Cul9 complex
     136851259 (Roc1a)
DNA repair and recombination proteins [BR:mrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      136851259 (Roc1a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      136851259 (Roc1a)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX DUF8003
Other DBs
NCBI-GeneID: 136851259
NCBI-ProteinID: XP_066981327
LinkDB
Position
23:10575598..10604151
AA seq 114 aa
MSAMEVDPQEEEVEVPSSSTSKADKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCI
ECQANQASVTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 345 nt   +upstreamnt  +downstreamnt
atgtcagcgatggaggtcgatccacaggaagaagaagtcgaggtgccttcctcaagcact
tccaaagccgacaagaaaagattcgaggtgaaaaagtggaatgcagtagctttatgggca
tgggatattgtcgtagacaactgtgccatttgtcgtaatcatatcatggatttatgcatc
gaatgccaagcaaatcaagcctctgttacatcagaagagtgcactgttgcctggggggtg
tgtaatcatgcatttcactttcattgcatttcgaggtggctgaagacacgtcaagtatgt
ccattagataaccgagaatgggaattccagaagtatggccattaa

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