Minicystis rosea: A7982_02298
Help
Entry
A7982_02298 CDS
T04613
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mrm
Minicystis rosea
Pathway
mrm03030
DNA replication
mrm03410
Base excision repair
mrm03420
Nucleotide excision repair
mrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7982_02298
03410 Base excision repair
A7982_02298
03420 Nucleotide excision repair
A7982_02298
03430 Mismatch repair
A7982_02298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrm03032
]
A7982_02298
03400 DNA repair and recombination proteins [BR:
mrm03400
]
A7982_02298
Enzymes [BR:
mrm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A7982_02298
DNA replication proteins [BR:
mrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A7982_02298
DNA repair and recombination proteins [BR:
mrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A7982_02298
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7982_02298
MMR (mismatch excision repair)
DNA ligase
A7982_02298
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A7982_02298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
UPF0758_N
RNA_ligase
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
APR76951
LinkDB
All DBs
Position
complement(2628969..2631014)
Genome browser
AA seq
681 aa
AA seq
DB search
MARSAGRAAHHTDAELARARERTAELRIAVAHHDYRYHVLASPEISDAEYDALVRELEDL
EHRFPDLVTEQSPTTTVGAAPSALFAPVEHGARLLSLDNVFDDEALDAWWARVEKALGRA
PTLVAEPKIDGVSVAIVYENGRYVRGATRGDGTIGEDVTANLRTIRSLPARLATTKPPRR
LEVRGEVFMRTMDFERINAELGDRKRPLFANPRNAAAGALRQKDPEVTASRPLSIYFHGL
VRADGLTLASQWEALSYFRAVGLRVHPASKRCATLDDAKAQVIELAAGRHDLPHEIDGVV
IKVDDFAAQEALGATSKAPRWAVAYKLPAEERTTKLLDIRVNVGRTGAVTPFAVLDPVRV
GGVTVQLATLHNESEIERRGVLIGDTVVVRRAGEVIPEVVAPIPSLRTGAERRFVMPKRC
PVCDTPIVKPEGEAVARCPNRACPAQMIEQVVHFASREAMDIEHLGESTARALLDQELIA
DVADLFTLTAADLAELPGFKDKSITNLLHAIAVAKDRPIDRLLLGLGIRHVGADAARRLA
DAFGSIDAIAAATEAELRAVEGVGPVIAAAVRDHFHGVARTSARRLLAKLRRADVRLSET
RRVPRGPLSGKTLVLTGTLATMTREEASTRIRARGGKASDSVSTKTDYVVAGEAPGSKLD
RAKKLGIRVIDEEALRRLLED
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggcacggagcgcgggcagagcagcacaccacacggatgccgagctcgctcgagcgcgg
gagcggacggcggagctccgcatcgccgtcgcgcaccacgactaccgctaccacgtgctc
gcttcgccggagatctccgacgccgagtacgacgcgctcgtccgcgagctcgaagatctg
gagcaccgctttcccgatctcgtcaccgagcagtctccgacgaccacggtcggcgccgcg
ccttcggcgctcttcgcgcccgtggagcatggagcgcgtctcctctcgctcgacaacgtc
ttcgacgacgaagcgctcgatgcgtggtgggcccgcgtcgagaaggccctcggccgcgcg
cccacgctcgtcgcggagcccaagatcgacggcgtctccgtggccatcgtctacgagaac
ggccgctacgtgcgcggcgccacgcgcggcgacggcaccatcggcgaggatgtcaccgcg
aacctccgcaccatccgctcgctgccggcgcggctcgccaccaccaagccgccgcgccgc
ctcgaggtccgcggcgaggtcttcatgcgcacgatggacttcgagcgcatcaacgccgag
ctcggcgatcgcaagcgcccgctcttcgcgaacccgcgcaacgccgccgcgggcgccctc
cggcagaaggatcccgaggtcacggcctcgcgcccgctctccatctacttccacggcctc
gttcgcgccgacggtttgacgctcgcatcgcagtgggaagcgctcagctactttcgcgcc
gtgggcctgcgcgtccatccggcctcgaagcgctgcgccacgctcgacgacgccaaggcc
caagtcatcgagctcgccgcggggaggcacgatctcccgcacgagatcgacggcgtggtc
atcaaggtcgacgacttcgcagcgcaggaggcgctcggcgccacctcgaaggcgccgcgt
tgggccgtcgcctacaagctgcccgcggaggagcggaccaccaagctgctcgacatccgc
gtgaacgtcgggcgcaccggcgcggtgacgccgttcgccgtgctcgatccggtgcgcgtc
ggcggcgtcaccgtgcagctcgcgacgcttcacaacgagtccgagatcgagcgccgcggc
gtgctcatcggcgacaccgtcgtggtccgccgcgccggcgaggtcatccccgaggtggtc
gctcccatccccagcctgcgcaccggcgccgagcgtcgcttcgtcatgccgaagcgctgc
ccggtctgcgacacgcccatcgtgaagcccgagggcgaggccgtcgcccgttgccccaac
cgcgcctgtccggcgcagatgatcgagcaggtcgtgcacttcgcctcccgcgaagcgatg
gacatcgagcacctcggtgagagcaccgcccgcgcgctcctcgatcaagagctgatcgcc
gatgtcgccgacctcttcaccttgaccgccgccgatctcgccgagctccccggcttcaag
gacaaatcgatcacgaacctcctccacgccatcgctgtcgccaaggatcgcccgatcgat
cgcctcctcttgggcctcggcatccgccacgtgggcgcggacgccgcgcgcaggctcgcc
gacgccttcggatcaatcgatgccatcgccgcggcgacggaggccgagttgcgcgcggtc
gaaggcgtcggccccgtcatcgccgcggcggtgcgcgatcattttcacggcgtcgcccgc
acgtccgcgcgccgtctcttggccaagctgcgccgcgccgacgtacgcctctcggagacg
cgccgcgtcccgcgcggcccgctctccggcaagaccctcgtgctcaccggcacgctcgcg
accatgacccgcgaagaagcgagcacccgcatccgcgcccgcggcggcaaggccagcgac
agcgtctcgaccaagaccgactacgtcgtcgccggcgaagcgcccggctcgaagctcgac
cgcgccaagaagctcggcatccgcgtcatcgacgaagaggccctccgccgcctgctcgaa
gactga
DBGET
integrated database retrieval system
