Minicystis rosea: A7982_04102
Help
Entry
A7982_04102 CDS
T04613
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mrm
Minicystis rosea
Pathway
mrm03030
DNA replication
mrm03410
Base excision repair
mrm03420
Nucleotide excision repair
mrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7982_04102
03410 Base excision repair
A7982_04102
03420 Nucleotide excision repair
A7982_04102
03430 Mismatch repair
A7982_04102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrm03032
]
A7982_04102
03400 DNA repair and recombination proteins [BR:
mrm03400
]
A7982_04102
Enzymes [BR:
mrm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A7982_04102
DNA replication proteins [BR:
mrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A7982_04102
DNA repair and recombination proteins [BR:
mrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A7982_04102
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7982_04102
MMR (mismatch excision repair)
DNA ligase
A7982_04102
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A7982_04102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_5
HHH_2
GGDEF_2
BRCT_2
HHH
PTCB-BRCT
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
APR78755
LinkDB
All DBs
Position
4791392..4793365
Genome browser
AA seq
657 aa
AA seq
DB search
MTTTQANMDTKAGGLDLDPALRARADELGARLEKYRASYYAGRPEISDAAYDALEDDLRA
LDPTHPVLAKVGSGELVAEWPKARHEIPMGSLNKAVNEEELRGWLTRCQELADKDGLGPV
SDLFVAEKLDGISIEVIYRDGKMVDAITRGDGEVGERITQNVARMKGVPARIKDKRSMSV
RGEIILRLSDMKKHFSSGTSPRNLAAGTSKRFDGTNCEHLTVLFYDIAAELDLPNEVEKF
AFIRSLGFATPATSHGGIDDVMATYQRYSGELRQKLDYEIDGLVVYVNSLHVQSLLGEVN
HRPRGAVAFKFASPAKVTKVLEIRWDTGPSGRVTPVAIVAPVELAGATVQRASLHNATNV
RALGIGVDDEVLVSRRNDVIPYVEEVVEKRGTVAEIPTKCGVCGSGLSVEGEYLVCRNTS
CTAIVEGRIQTWVGAIGALEWGDKLIEQLVEAKLVREPRDLYKLTWEQIAGLDRRGEKSA
KKCLAELSSRLPITLPVFIAALGMDNFALQTAKLLVTAGHKTIEAMLAAKEEDLAGINGL
GPIKAASIVRGLTARREEIQRLLEAGIVPVTLDEQGPLAGLSFAFTGSSSRPRNELTQLV
ESKAGRVLASVTKDLNYLVIADPASTSSKAVKARKYGTKLITEEELDQLIAEREKPA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacccaagcgaacatggacacgaaggcgggcggcctcgatctcgatccggcc
ctgcgcgcgcgcgccgacgagctcggcgcacggctcgagaagtaccgggccagctactac
gcgggtcgccccgagatctccgacgcggcctacgacgcgctcgaagacgatctgcgcgcc
ctcgatccgacgcacccggtgctcgccaaggtcggctccggcgagctcgtcgcggagtgg
cccaaggcgcggcacgagatccccatgggatcgctcaacaaggcggtcaacgaagaggag
ctccgcgggtggctcacccgctgtcaggagctcgcggacaaggacgggctcgggccggtc
agcgatctcttcgtcgccgagaagctcgacggcatctccatcgaggtcatctaccgcgac
ggcaagatggtcgacgccatcacgcgcggcgacggcgaagtgggcgagcgcatcacgcag
aacgtggcgcgcatgaagggcgtcccggcgcgcatcaaggacaagcgctcgatgagcgtg
cgcggcgagatcatcctccgcctctccgacatgaagaagcatttttcgagcggcacgagc
ccgcgcaacctcgcggccggcacctcgaagcgcttcgacgggacgaactgcgagcacctc
accgtgctcttctacgacatcgcggccgagctcgatttgccgaacgaggtcgagaaattc
gccttcatccgcagcctcggcttcgccacgccggcgacgagccacggcggcatcgacgac
gtcatggccacctaccagcgctactcgggcgagctccggcagaagctcgattacgagatc
gacgggctcgtcgtctacgtcaactcgctgcacgtgcagtcgttgctcggcgaggtgaac
catcggccgcgcggcgcggtggcgttcaagttcgcgtcgccggcgaaggtcaccaaggtc
ctcgaaatccgctgggacacgggtccgagcgggcgcgtgacgccggtggccatcgtggcg
ccggtggagctcgcgggcgccaccgtgcagcgcgccagcctccacaacgcgaccaacgtg
cgcgcgctcggcatcggcgtggacgacgaggtgctcgtctcgcgccgcaacgacgtcatc
ccctacgtcgaggaggtcgtggagaagcgcggcacggtcgccgagatccccaccaagtgc
ggcgtgtgcggctcggggctctcggtcgaaggcgagtacctcgtctgccgcaacacctcg
tgcacggccatcgtcgaaggccgcatccagacctgggtgggcgcgatcggcgcgctcgag
tggggcgacaagctgatcgagcagctcgtcgaggccaagctcgtccgcgagccgcgcgat
ctctacaagctcacgtgggagcagatcgccgggctcgatcggcgcggggaaaagagcgcg
aagaagtgcctcgccgagctctcgtcgcggctcccgatcacgctgcccgtgttcatcgcc
gcgctcgggatggataacttcgcgctgcagacggcgaagctcctggtcaccgcggggcac
aagaccatcgaggccatgctggccgcgaaagaggaagatctcgcgggcatcaacggcctc
ggccccatcaaggcggcgagcatcgtgcgcgggctcacggcgcggcgggaggagattcag
cggctgctcgaagccggtatcgtgcccgtcacgctcgacgagcaagggccgctcgcgggg
ctctcgttcgccttcaccggatcgagctcgcgcccgcgcaacgagctcacccagctcgtc
gagtcgaaggccggccgcgtcctcgccagcgtcaccaaggatctcaactacctggtgatc
gccgacccggcgtcgacgtcgagcaaggccgtgaaggcgcgcaaatacgggacgaagctc
atcaccgaagaggagctcgatcagctcatcgccgagcgggagaagccggcctga
DBGET
integrated database retrieval system
