Melioribacter roseus: MROS_1743
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Entry
MROS_1743 CDS
T02176
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mro
Melioribacter roseus
Pathway
mro03030
DNA replication
mro03410
Base excision repair
mro03420
Nucleotide excision repair
mro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MROS_1743
03410 Base excision repair
MROS_1743
03420 Nucleotide excision repair
MROS_1743
03430 Mismatch repair
MROS_1743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mro03032
]
MROS_1743
03400 DNA repair and recombination proteins [BR:
mro03400
]
MROS_1743
Enzymes [BR:
mro01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MROS_1743
DNA replication proteins [BR:
mro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MROS_1743
DNA repair and recombination proteins [BR:
mro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MROS_1743
NER (nucleotide excision repair)
GGR (global genome repair) factors
MROS_1743
MMR (mismatch excision repair)
DNA ligase
MROS_1743
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MROS_1743
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
RNA_ligase
Topo-V_HhH_2_2nd
5_3_exonuc
RUBY_RBDX
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
AFN74977
UniProt:
I6YWP0
LinkDB
All DBs
Position
2037474..2039486
Genome browser
AA seq
670 aa
AA seq
DB search
MKTNPQKRIEELRRLIKEHDYRYYVLAQPVISDYEYDKLYKELVELEKTYPEYVTPDSPT
QRVGSDITNEFKPVAHRIPMLSLSNTYNEEELYDFNRRVKEGLPENEKVEYVCELKIDGV
SVSVIYEKGILVRAATRGDGTTGEEITNNVKTIKSLPLSVKTEVEGYRLEDVEVRGEIYM
ELDDFEKINAERELNGEKTFANPRNLVAGTIKLLDPKAVAKRPLKIFVYYLYSQSEALES
QYQNLKLLEAMGLPVNPNYRLCGSIEDVIEFCREWEGKRYTLPYEIDGAVIKVNSIRQQQ
MLGNIAKSPRWAVAFKFKARQEKTKLKKIVWQVGRTGTLTPVAELEPVFLAGSTISRATL
HNIDEIRRKDIREGDTVVIEKGGDVIPKVVSVDLSRRPENSVEVKLPDKCPVCNSKLFKP
EGEVAIYCENPACPAQIKGRIAHFASRGAMDINGLGESLINLFVDLGFLKDYADVYSLKT
KRDELIKIERLGEKSVDNLLKSIEESKNRSFDKVLFALGIRYVGAGAAQKLAEHFGSIDQ
LMKADEEEIESIQDIGPSISKSIKRFFSDPKNLDIIERLRKAGLKFKMDEQKKISDKLGG
KSFVLTGALSSMSRDKAKELIIANGGKVLSAISKNTDYLVAGEKAGSKLDKARKLGVKII
SEDEFLNMIK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaatcctcaaaaaagaattgaagaactgcgccgtttaataaaagagcacgat
taccggtattacgtgctggctcagcctgtcatttcagattacgaatatgacaaattatat
aaagagctcgtggagctcgaaaagacgtatcctgaatacgttacccccgattcgcctacg
cagcgagtcggttcggatattacgaacgaattcaagccggtcgctcatcgtatccctatg
ctttctctttcgaatacgtataacgaggaagagctttatgatttcaatcgcagggttaaa
gaaggacttcccgaaaacgaaaaagttgaatacgtatgcgaattgaaaattgacggagtc
tccgtatctgttatttatgaaaaaggaatcctggtacgcgccgctacaaggggcgacggc
acaaccggagaggaaattacaaataacgtcaaaaccataaaatcgctccctctttcggtt
aaaacggaagtagaaggatacagactggaggacgtggaagtacgcggcgaaatttatatg
gaattggacgactttgaaaaaattaacgccgaacgcgaattgaacggcgaaaaaaccttt
gccaatccgcgtaatctcgttgccggcacaattaaattgctcgacccgaaagcagtagcc
aaaagacctctcaaaatatttgtttattatctctattctcaaagcgaagcgcttgaatcg
cagtatcaaaacttgaaattactcgaagcaatgggtctgcccgtcaatcccaattacaga
ttgtgcggttcgatcgaggacgttatagaattttgcagggaatgggaagggaaacgttac
acgctgccttatgaaattgacggcgcggttatcaaagtaaattcgatacgtcagcagcaa
atgctcggcaatattgccaaatcgcccagatgggctgtggctttcaaattcaaagcccgt
caggaaaaaacaaaattgaaaaaaattgtttggcaggtaggaaggacgggtacgcttacg
cccgtagccgaattggaaccggtatttcttgcgggctccactatcagccgcgctactctt
cataacatcgatgaaatcagaaggaaagatataagagaaggcgatacggttgtaatcgag
aaaggcggcgacgtgattccaaaagtagtgagcgtagatttaagtcgtcgtcccgaaaat
tctgtcgaagttaaattgcccgacaaatgtccggtatgcaactctaaactttttaaacct
gaaggcgaggttgcaatctattgtgagaatccggcatgccccgctcaaataaagggaaga
atagctcattttgcatctcggggagcgatggacatcaacggattgggcgaatcgttgatt
aatttgttcgtcgatctcggtttcctgaaagattatgccgacgtttattctttgaaaacg
aaacgggatgaattgataaaaatcgaaaggctcggcgaaaagagcgtggataatctgctt
aaatcgattgaagaaagcaaaaaccggagcttcgacaaagttctttttgcgctcggtatt
cgttacgtcggagccggcgcagcacagaaacttgccgagcatttcggctcgatagaccaa
ttgatgaaagcagacgaagaagaaatcgaatcgattcaggatatcggacccagcattagc
aaaagcatcaaacgattcttctccgatcccaagaacctcgatattattgaaagattgcgc
aaagccggtcttaaatttaaaatggacgaacaaaaaaaaatatccgataagctcggcggc
aaatcatttgtacttacgggcgcgctctcgtccatgtcgcgggataaagcaaaagaattg
ataattgccaacggcggcaaggttctgtctgcaatcagtaaaaatacggattacctcgta
gccggcgaaaaagcgggttccaagctcgataaggctcgcaaactcggcgtgaaaattata
agcgaagatgaatttctgaacatgattaaataa
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