Methylomonas rapida: NM686_021380
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Entry
NM686_021380 CDS
T08781
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mrp
Methylomonas rapida
Pathway
mrp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NM686_021380 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrp03400
]
NM686_021380 (nth)
Enzymes [BR:
mrp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NM686_021380 (nth)
DNA repair and recombination proteins [BR:
mrp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NM686_021380 (nth)
Prokaryotic type
NM686_021380 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WAR44860
LinkDB
All DBs
Position
4527139..4527774
Genome browser
AA seq
211 aa
AA seq
DB search
MNNQTRLAIFDRLATAIPEPTTELNYDTPFELLIAVVLSAQATDKGVNKATEKLFDVANT
PQAILALGEAGLKEYIKTIGLFNSKAANIIKLCEALLKHHGGDVPQDRAALEALAGVGRK
TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKNVLEVEKKLDKTVPKQHKKDAHHLLI
LHGRYVCMARKPRCAECCIADLCEFKQKSLY
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccaaaccagactagccattttcgatcgcctcgccactgcgattccggagccg
accactgaattgaactacgacacgccgttcgaattactgattgcggtggtgctgtccgcc
caggccaccgataaaggcgtcaataaagccacggaaaaactgttcgacgttgccaatacg
ccgcaggctattttagccttgggagaagcaggtctgaaggaatacatcaagaccataggc
ttgttcaatagcaaggccgccaacatcatcaaactttgcgaagccttgctaaagcaccat
ggcggcgacgtgccgcaagaccgtgctgccctggaggctttggcgggtgtgggccgcaag
accgccaatgtgattttgaataccgcctttggccatcctacgatcgcggtggacacccat
attttccgcgtcgccaaccgcaccggactagcaccgggcaaaaacgtgctggaagtggaa
aaaaaactcgataaaacggtgcccaaacagcataaaaaagacgcccatcatttattgatc
ctgcatggccgctatgtctgcatggcgcgaaagccgcgctgcgcagagtgctgcatcgcg
gatttatgtgagtttaagcaaaaaagcctgtactga
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