Allomuricauda ruestringensis: Murru_3471
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Entry
Murru_3471 CDS
T01598
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mrs
Allomuricauda ruestringensis
Pathway
mrs03030
DNA replication
mrs03410
Base excision repair
mrs03420
Nucleotide excision repair
mrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Murru_3471
03410 Base excision repair
Murru_3471
03420 Nucleotide excision repair
Murru_3471
03430 Mismatch repair
Murru_3471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrs03032
]
Murru_3471
03400 DNA repair and recombination proteins [BR:
mrs03400
]
Murru_3471
Enzymes [BR:
mrs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Murru_3471
DNA replication proteins [BR:
mrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Murru_3471
DNA repair and recombination proteins [BR:
mrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Murru_3471
NER (nucleotide excision repair)
GGR (global genome repair) factors
Murru_3471
MMR (mismatch excision repair)
DNA ligase
Murru_3471
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Murru_3471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
Auto_anti-p27
HHH
Mig-14
zf-C4_Topoisom
PADR1_N
Motif
Other DBs
NCBI-ProteinID:
AEM72483
UniProt:
G2PP61
LinkDB
All DBs
Position
complement(3835262..3837262)
Genome browser
AA seq
666 aa
AA seq
DB search
MNIQDKITSLRNELREHNYKYYVLDEPSISDYEFDMKLEELQKLEAEHPEFYDPTSPTIR
VGGMVTKNFETVPHEHRMYSLDNSYSKEDLEDWEKRVQRILGDAEVEFTCELKYDGASIS
LTYEDGKLVKAVTRGDGFQGDDVTNNIKTIKSVPLQLKGDYPPKFDIRGEIILTLEGFAK
MNAERVEAGEDPYMNPRNTASGSLKLQDSALVAQRPLECLLYSIAGDDLGVSSQFEVLEK
ARSWGFKVPTVAKLCKSTTEVMQFADYWEVNRHNLPYETDGVVVKINSIQHQDELGYTAK
SPRWAMAYKFKAEQATTTLNKITYQVGRTGAITPVANLAPVLLAGTTVKRASLHNADQIA
KLDVREGDSVFVEKGGEIIPKIIKVDFTKRDAGSKPTEYITHCPECGTELIRKEGEAQHF
CPNDMGCPPQITGRIQHFISRKAMDIEGLGGETVELLFKEGLIGNYADLYTLTKEQILPL
ERMADKSAENLVNGVQASKEIPFERVLFALGIRYVGETVAKKLAKAFKNIDALMVASQEQ
LIAVDEIGERIAESVVNFFSEPANVEIIDRLKSYGLQFSLSEEQLENQTDKFKGQTFVVS
GVFESISRNDLKKMIEDNGGKVSSSISSKTSFLVAGDKMGPSKKTKAETLGVPIISEQEF
LQKLEV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccaagataaaataacctccctacgcaatgagctaagggagcataattataaa
tactacgtgctcgatgagccctccatttccgattatgagtttgatatgaaactcgaagag
cttcagaaattggaagcggagcaccctgaattttacgatcccacttcgcccaccatacga
gtggggggaatggttaccaaaaactttgagaccgttccacatgaacatcgcatgtattcc
ttggacaattcgtattccaaggaagacttggaggattgggagaaacgggttcagcgtatt
cttggggatgcagaagtggaatttacctgcgagttgaaatatgatggggcttccatcagt
ctaacttatgaggacggaaaattggtgaaagccgtcactcggggcgatggttttcaaggt
gatgatgtgaccaacaacatcaaaacgattaaatcggttcctttgcaactaaaaggagac
tatccgccaaaatttgatattcgtggggaaattatcctaaccctcgagggcttcgcaaaa
atgaacgcagagcgtgttgaagcaggcgaagacccttatatgaaccctagaaataccgca
tccggaagtttaaaacttcaagatagtgccttggtggcccaacgcccgttggagtgtctt
ttgtacagcatcgcaggtgatgatcttggggtaagctctcagtttgaagtcttggaaaaa
gcaagatcatgggggtttaaagtgccgacggtggccaaactttgcaaatccacaacagaa
gtgatgcagtttgcggattattgggaagtgaaccgtcacaatctgccctacgaaacagac
ggagtagtagtgaagataaatagcatccagcaccaagacgagcttggctatacggccaaa
tcaccgcgctgggccatggcctacaagttcaaggcggaacaggccaccacaactttaaac
aaaatcacctatcaagttgggcgtacaggtgcgataacccctgtggccaacttagctcct
gttttgttggcaggaaccacggtaaaacgtgcttctttgcacaatgcggaccaaattgcc
aagcttgatgttcgcgaaggggattccgtatttgtggaaaaaggaggtgaaatcatacct
aaaattattaaggtcgattttaccaaacgggatgctggctccaaacctaccgagtatatt
acccactgtcccgaatgtggcactgaattgatccgtaaagaaggcgaggcccagcatttt
tgtccaaacgatatgggttgcccccctcagataaccgggcgcatccaacactttatttcc
cgaaaggccatggatattgaaggtttggggggcgaaacggtggaattgctctttaaagaa
gggttaatcggtaattatgcagacctctataccttgaccaaggaacaaattttgccattg
gaacgtatggctgataaatcggccgagaacttggtgaatggcgtacaggcatccaaggaa
attccgtttgaacgggtgctttttgctttggggattcgatatgtaggtgaaacggttgcc
aaaaaactggcaaaagccttcaaaaatattgatgctttgatggttgcttctcaagaacaa
ttgattgcagtggatgaaattggtgagcggattgcggaaagtgtggtgaactttttctcg
gagcccgctaatgtggagattattgaccgattaaaatcctacggattgcaattctcattg
tccgaggagcaattggaaaaccaaacggataaattcaaggggcagacctttgtggtgtcc
ggcgtgtttgaatctatcagcagaaacgatttaaagaagatgatcgaggacaacggaggc
aaagtgtcttcgtccatatcttcaaaaacaagttttttggtggctggggacaaaatgggt
ccaagtaaaaaaacaaaggcggaaaccttgggagtacccataatctcggaacaggaattt
ttgcaaaaactggaagtatga
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