Malassezia restricta: MRET_1957
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Entry
MRET_1957 CDS
T06113
Name
(RefSeq) CCR4-NOT complex subunit CAF16
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
mrt
Malassezia restricta
Pathway
mrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_1957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_1957
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MRET_1957
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_28
Zeta_toxin
RsgA_GTPase
AAA_16
Arf
nSTAND3
MMR_HSR1
AAA_15
AAA_22
AAA_23
AAA_14
AAA_33
Motif
Other DBs
NCBI-GeneID:
38738723
NCBI-ProteinID:
XP_027484538
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Position
III:580915..581835
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AA seq
306 aa
AA seq
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MSASLPAVEVHNLHYHFASSTSSALEGCDLVLERGARCLLIGANGAGKSTLLRLLAGKRL
CEANILVFGQDVFHSPPCGITFLGTEWAMNPVVRGDITVSDFLDSVGGFRFSERRDMLLD
LLDVDLSWKMHMISDGERRRVQLCMGLMAPWDLLLLDEVTVDLDVQVRCDLLDFLRKESE
MRGATIVYATHIFDGIHDFPTHIVHLQMGRTTSPLPLPWPLHLDANTHPDILTCLPTSIK
ETIQSSTSTYSPALLPLALAWLREDRVLREQYEQSRGVKRGRIVSGETKDAKKFFSQYDY
YSNYTR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctctctgcctgccgtagaagtacacaatttgcattaccactttgcatcgagt
acttcttcggcactagaaggatgtgatttggtgttggaacgcggtgctcgttgcctgttg
atcggtgcaaatggtgctggtaagagcacgctccttcgcctgctcgctggaaagcgtctg
tgcgaggccaacattcttgtgttcggacaagatgtatttcattccccaccatgtggtatc
acgttcctaggcactgaatgggctatgaatccagtcgtgcgaggtgatatcactgtaagt
gactttctcgattcggtgggtggctttcgcttcagcgaacgacgcgatatgctgctagac
cttctagatgtcgatttgtcctggaaaatgcacatgattagcgatggcgagagacgacgt
gtccagctttgtatggggcttatggcgccctgggacttgctcctactggatgaagtgacc
gtggacctggacgtgcaggtccgctgcgatctactcgactttctgcgcaaggaaagtgag
atgcgcggagcaaccattgtatatgcaacgcacatctttgatggcatacacgacttcccc
acgcatattgtccatttgcagatgggccgtacgacctcacctctacctctgccctggccg
ttgcatctggacgcaaacacacatcctgatatcctcacttgcctccctacatccattaag
gaaactattcaatcaagtacttctacctattcacctgcgctattgccgttggcacttgct
tggcttcgcgaagaccgcgttttgcgtgaacagtacgagcaaagccgaggtgtaaagcgc
ggccgtattgtcagtggagaaactaaggatgcaaagaaatttttcagtcaatatgactac
tactccaactatacgaggtga
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