Malassezia restricta: MRET_2730
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Entry
MRET_2730 CDS
T06113
Name
(RefSeq) U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_2730
Spliceosome [BR:
mrt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MRET_2730
Complex C
U5 SnRNP specific factors
MRET_2730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
Ras
EFL1
Roc
Motif
Other DBs
NCBI-GeneID:
38739496
NCBI-ProteinID:
XP_027485026
LinkDB
All DBs
Position
IV:complement(608636..611548)
Genome browser
AA seq
970 aa
AA seq
DB search
MDDYDEFGNYIGPLSESEDEQEALGVEHAEPPPEPPAEDASGAQEEGAVIMHVDEPASQA
VVLHEDKVYYPSASEVYGDDVETLVQEEDAQPLTQPIVEPERVRSFAVEEQGLPEVRFDR
QFMLNMMHFPDMIRHVAVVGHLAHGKTALVDMLVEETHRVQVDAEKPLRYTDTHVLEQER
GLSIRAMPMSFVLPTTRGKSYLVHVLDTPGHTNFQDEVAASLRLADGVVLVVDVVEGVMC
NTETIIRYCVREGLPIVLVLNKIDRLVLELRLPPTDAFFKIQLTLEEVNRVVGEASGGDP
ERRLSPERGNVAFASTQAGYCFTLRSFAQMYAERAPIDVDAFAQRLWGHIYFDRASRTFT
RRAPHPDAPRSFVQFVLEPLYKLYTLVLSADVDVLRRTLASLRIQLPAAAFKMDVRPLLK
LVLNAFLGSSTGLVDMCVEHLPSAAEASKAATTTAPPDSVLARAIERCDAQGPLLIQIAK
VYPTSDATEFRAFGRVLSGTVSCGQSVKVLGPTYTPEDEEDMAVETVSGVYVAEARYAVH
APGVPAGNWVLLSGIDATIAKSATVCDTALPVADTYVLRPIVHMTESVLKVAIEPLRPAE
LPKMLDGLRKVNKCYPLVSTRVEESGEHTLLGTGELYLDCVMHDLRELYAEMEIKISDPV
VKFCETVVETSAVQCFADTPNKHNRLTLIAEPLEDGIAEDLERGLIDIHLPPRALARIFQ
ERYGWDALAARSVWAFGPDDHGPNVLVDDTLPDDVDKVQLYTVREYIKQGFQWATREGPL
CDEPMRGVKIRLCHARIATEPIHRGGGQLIPTARRATYAAFLLATPRLMEPVYAAEIQTP
PECVGTIYTLLARRRGHVTSDAPKAGTPLSTMHALLPVIDANGFETDLRVATQGQAFVLQ
MFHHWAVVPGDPSDTTIPLRPLEPAPPLGLARDFVLKMRRRKGLGDTVAVSTYLEHEMAV
ALAQAGMDIA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggacgattacgacgagtttggtaattatatcgggccgttgtcagagtcggaggatgag
caggaggcattgggtgtggaacatgctgagcctccgcctgagcctcccgccgaggacgcg
agcggcgcccaggaggaaggcgcagtgatcatgcatgtcgatgagcccgcgtcccaagcg
gtcgtgctccatgaagacaaggtatactacccctctgcttccgaggtgtacggtgacgac
gtcgagacgctcgtgcaggaggaagacgcccagcccctgacgcagccgatcgtcgagcct
gagcgagtgcgtagctttgccgtggaagagcaggggctgccggaagtccgcttcgaccgg
cagtttatgctgaacatgatgcactttcccgatatgatacggcatgtggccgttgttggc
catctggcgcacggcaaaaccgcgctcgtggacatgctggtggaagagacgcaccgcgtc
caagtggacgccgaaaagccgctgcggtacactgacacgcatgtgctggagcaagaacgc
ggactgtcgattcgtgcgatgcccatgtcgttcgtcttgcccacgacacgcggcaagagc
taccttgtgcacgtgctggacacgccgggccatacgaatttccaggacgaagtggctgcg
tcgctgcgcctggcagacggtgtcgtgctggtcgtcgatgtcgtcgaaggtgtgatgtgc
aatacggagactatcatccggtactgcgtgcgtgaaggcctgccgatcgtgctggtcctc
aacaagatcgaccgactcgtcctcgagttgcgtctgccgcccaccgatgcctttttcaag
atacagcttacgctcgaggaggtgaatcgcgtcgttggcgaggcgagcggcggcgatccc
gagcgtcgtctcagccccgagcgcgggaatgtcgcgttcgcgagcacccaggccggctac
tgcttcaccctgcgcagcttcgctcagatgtatgcggagcgcgcaccgatcgatgtggac
gcctttgcgcagcgcctatggggccacatctactttgaccgcgcatcgcgcacctttacg
aggcgcgcgccgcatcctgacgcgccgcggtcgtttgtgcagtttgtgctcgagccgctg
tacaagctgtacacgctcgtgctcagtgccgacgtcgacgtgctgcgacgcacacttgcg
tccctgcgcatccagttgccggcggccgcgttcaaaatggacgtgcgcccgctcctcaag
ctcgtgctgaatgcgttcctgggatcgtcgacgggcctggtcgatatgtgcgttgagcat
ctgcctagtgcggccgaggcctccaaggccgccaccacgacggcgcctcccgacagtgtg
ctggcgcgcgcgatcgagcgctgtgacgcccaggggcctctgttgatccaaatcgccaaa
gtgtacccgacaagcgatgcgaccgagtttcgcgcgtttgggcgtgtgctgagtggcacc
gtgtcgtgtggtcagtcggtcaaggtgctggggcccacgtacacgcccgaagacgaggag
gacatggccgtcgagacagtgagtggcgtgtacgttgccgaggcgcgatacgcagtccat
gcaccgggagtgccggccggcaactgggtgctgctgagcggcattgatgcgacgatcgcc
aagagcgcgacggtgtgtgatacggcgctgcctgtggcggacacgtacgtgctgcgaccc
attgtgcacatgacagaaagcgtgctcaaggtggccattgagcccctgcgccccgcggag
ctgcccaagatgctcgacggactgcgcaaggtgaacaagtgctacccgctcgtatcgacg
cgcgtcgaagaaagtggtgagcatacgctgctgggaacgggcgagctgtacctcgactgt
gtgatgcacgatctgcgcgagctgtacgctgagatggagatcaagatcagcgatccggtc
gtcaagttctgtgagacggtcgtcgagacgagcgccgtgcagtgctttgcggacacgccg
aacaagcacaaccgactcaccctcatcgccgagccgctggaggacggcattgccgaggac
ctcgagcgcggcctcattgatattcacctgccgccgcgtgcgctcgctcggattttccag
gagcgctacggctgggacgccctggccgcccgctcggtgtgggcgtttggacctgatgac
cacgggccgaacgtgcttgtggacgacacgctgccggacgacgtcgacaaggtgcagctg
tacacggtgcgcgagtacattaagcagggcttccagtgggcgacgcgcgagggccccttg
tgtgacgagccgatgcggggcgttaagatccgcctgtgccatgcgcgcatagccaccgag
cccattcaccgcgggggcgggcagctgattcccacggctcggcgcgcgacgtacgcggcg
ttcctcctggcgacgccgcggctcatggagcccgtgtacgccgccgagatccagacgccg
ccggagtgtgtcggcacgatttacacgctcctcgcacggcgccgcggacatgtcacgagc
gacgcgcccaaggctggcacgccgctcagcacgatgcacgcgttactgcccgtgatcgat
gcgaacggcttcgagaccgatctgcgcgtcgcgacgcagggccaggcgttcgtgctgcag
atgttccaccactgggccgtggtgccgggcgacccgagcgacacgaccatccccctgcgc
ccgctggagccggcgccgccgctgggcctcgcgcgcgactttgtgctcaagatgcgccgc
cgcaagggcctgggcgatacggtggccgtgtcgacgtacctcgagcacgagatggccgtg
gctctggcgcaggccggtatggacatagcctag
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