Mucilaginibacter rubeus: DEO27_023210
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Entry
DEO27_023210 CDS
T06362
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mrub
Mucilaginibacter rubeus
Pathway
mrub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DEO27_023210 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrub03400
]
DEO27_023210 (nth)
Enzymes [BR:
mrub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DEO27_023210 (nth)
DNA repair and recombination proteins [BR:
mrub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DEO27_023210 (nth)
Prokaryotic type
DEO27_023210 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
HHH_5
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QEM12794
UniProt:
A0A5C1I4R8
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All DBs
Position
complement(5812972..5813733)
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AA seq
253 aa
AA seq
DB search
MLKAERYRHFVEYFSKNQPNPVTELHYNNPFQLLVAVILSAQCTDKRINQVTPALFERFP
TAQDLAAATSDEVFSYIRSVSYPNNKAKHLVGMGKMLIDVFNGEVPSGIENLQKLPGVGR
KTANVIASVIFEEPAMAVDTHVFRVANRIGLTNNARTPLAVEKQLVQNIPKEYIAVAHHW
LILHGRYICLARSPKCDVCPLTWFCRYYERNNTEAALQRAEAAKVKKAKEAKKKKALNTI
SKELKKRSVEKDI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagccgaacgctaccgccattttgttgaatatttttctaaaaatcagcctaat
cccgttaccgagctgcattataataacccgtttcagttactggtggctgtgatactttcg
gcacagtgtaccgataaacgtattaaccaggtaacccccgcattatttgagcgttttccc
acggcacaagacctggctgcggcaacatccgacgaggttttttcttacatccgttccgta
agttatcctaataataaggctaaacatctggtaggcatgggcaaaatgctgatagatgtt
tttaatggcgaagtgccatcagggatagaaaacctgcagaaattacccggcgtaggccgt
aaaacagcaaatgtaattgcctcggttatttttgaagagccggccatggctgttgatacc
catgtgttcagggtagccaaccgcatcggtttaacaaataatgcgcgtacgccgcttgct
gttgaaaagcaattagttcaaaatatcccgaaagaatacatagccgtagcgcatcattgg
ttgatattgcatggccggtatatttgcctggcgcgcagccccaaatgtgatgtttgtccg
ctaacatggttttgccggtactatgaacgtaacaatactgaagccgcgctgcaaagggca
gaagccgccaaggttaaaaaggccaaggaagcaaaaaagaaaaaggcactgaatactata
agtaaggaactgaagaagaggagtgtggagaaagatatttga
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