Mauremys reevesii (Reeves's turtle): 120385068
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Entry
120385068 CDS
T07797
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120385068 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrv03041
]
120385068 (EFTUD2)
Spliceosome [BR:
mrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120385068 (EFTUD2)
Complex C
U5 SnRNP specific factors
120385068 (EFTUD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
120385068
NCBI-ProteinID:
XP_039360113
LinkDB
All DBs
Position
LG17:complement(3485824..3522063)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNSLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTTLPHTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWILIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacctgtatgatgagtttgggaattacatcgggccagagctcgactctgat
gatgatgatgatgaactgggcagagaggccaaggatcttgatgagcttgatgatgatgat
gacgacgatgatataggagatcatgatgacgatcatcccggaatggaggtggtactgcat
gaggataagaaatactatccgactgctgaagaggtttacggacctgaggtagagaccata
gtgcaggaggaagatacccagcctctcactgagcctattattaaacctgtgaaaaccaag
aaattctccctgatggagcagacgttgcctgtcactgtgtatgagatggatttcctggca
gatctgatggacaactctgaactgattcggaatgtgaccctgtgtgggcatctccaccat
ggcaagacttgttttgtggattgcctgatagagcagacgcacccagagatcaggaagcgc
tacgaccaggatctttgctacaccgacatactgttcacggagcaagagaggggtgttggc
atcaagagcaccccagtgactgtggttctaccagacaccaaggggaaatccttcctcttc
aacatcatggacacgccaggccatgtgaacttttctgatgaggttactgccggccttcgt
atttcggacggagttgtgcttttcattgatgcggccgaaggggttatgctgaacacggag
aggctgatcaaacacgcagtgcaggagaggctggcagtgaccgtgtgcattaataagata
gatcggctgatcctggagctcaagcttccccccaccgatgcctattacaaactccgacac
atagtagatgaggtcaacagcttgatcagcatgtattccaccgatgagaacctgatcctc
tcccctcttctggggaacgtctgcttctccagttcccagtacagcatctgcttcacgctt
ggctcctttgcaaagatttacgcagacacgtttggagacatcaattaccaggagtttgca
aagcggctttggggtgacatctacttcaaccccaagacacgaaagttcactaaaaaggcc
ccgaccagcagttcccagcggagctttgtggagtttgtcctcgaacccctgtacaagatc
ctggctcaggtggttggtgatgtggacaccaccctcccccacactctggatgagctgggc
atccatctgaccaaagaggagctgaagctaaacattcgacccctgctaaggctcgtctgc
aagaagttctttggggagttcacaggctttgtggacatgtgtgtgcagcacattccctcc
ccaaaggtgggcgccaagaccaaaatcgagcacacctacaccggcggcgtcgactcagac
ctgggggaggccatgagcgagtgtgaccctgatggtccactaatgtgtcacaccacgaaa
atgtacagcacagacgacggggttcagttccacgcctttggcagggtgctgagtgggacc
atccatgcaggtcagcccgtgaaggtcctgggagaaaactacacattggaggatgaagag
gattcccagatctgcactgtgggacggctctggatctcggtggcaagataccacatagag
gtgaaccgggtccctgccggcaactggatcctaatagagggggtggaccagcccattgtg
aagactgcaaccatcacagaacctagaggcaatgaggaggctcagatcttccgtccattg
aagttcaacaccacgtctgtcatcaaaatagctgtggagccggtcaacccttcggagctc
cctaaaatgctggatggcctgcggaaagtcaacaagagctacccgtcgctcaccaccaag
gtggaagaatctggggagcacgtgatcctggggacgggggagctgtacctggactgtgtg
atgcatgacttacggaagatgtattcagagattgatatcaaggttgctgatccggttgtg
acgttctgtgagactgttgtggaaacttcctccctgaagtgttttgctgagacacccaat
aagaagaacaagatcacaatgattgctgagccactggagaaggggctcgcggaggacatt
gagaatgaggtggtccagatcacctggaacaggaagaagctgggcgagttctttcagacc
aagtatgactgggatttgctggctgcccgctccatctgggcctttgggccagacgctact
ggcccaaacattctggtagatgacacgctgccctcggaggtggataaggctctgctgggc
tctgtgaaggacagcatcgtacaggggttccagtggggcacgagggaagggcccctctgc
gatgagttgatccgcaatgtgaagtttaagatcctggatgccgtgatcgctcaggagccg
ctgcaccggggaggagggcagattatcccaacagcgaggagagttgtgtactccgccttc
ctcatggccactcctcggctgatggaaccgtactactttgtggaggtccaggcccctgct
gattgcgtgtctgcagtgtacactgtgctggcccggcggagaggtcatgtgactcaggat
gctccaatcccaggctccccgctttacaccatcaaagcctttatcccagccattgactcg
ttcgggtttgagactgacttgaggactcacacgcagggacaggctttctctctctccgtc
ttccaccattggcagattgtgcctggagaccccttggacaagagtatcgtcatccggccc
ttggagccccagccggcacctcacctggccagagagttcatgatcaagaccaggcgcaga
aagggcttgagcgaggacgtgagcatcagcaagttcttcgacgaccctatgttgctggag
ctggccaagcaggacgttgttctgaactaccccatgtga
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