Mauremys reevesii (Reeves's turtle): 120407650
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Entry
120407650 CDS
T07797
Symbol
DDX58
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv04622
RIG-I-like receptor signaling pathway
mrv04623
Cytosolic DNA-sensing pathway
mrv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120407650 (DDX58)
04623 Cytosolic DNA-sensing pathway
120407650 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120407650 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mrv04054
]
120407650 (DDX58)
Enzymes [BR:
mrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120407650 (DDX58)
Pattern recognition receptors [BR:
mrv04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
120407650 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_25
MIP-T3
Motif
Other DBs
NCBI-GeneID:
120407650
NCBI-ProteinID:
XP_039399365
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All DBs
Position
LG6
Genome browser
AA seq
951 aa
AA seq
DB search
MVITVSLVFITHERFTVLLLSTVAGVTLKEYVSSNQSWSCYERTNHFILYWFLSDARERI
QTEEQKKGLTAAAALFVDSILQLESEGWFRGFLDALNEAGYTGLREAIENWDFQKLESLE
EHRQLLKRIEATMRDIDAEQIIPYLNTCLIDRECEEIQQVKELKGRMAGAVKLIECLARS
DKENWPKTFHLALERAGYDPVSKLWNMKEGNDKEMDVEMMEDQNGNSSALDINVQYSEEA
EVPNFSGSPCSPSEVSQQSTYGPKKARSYQTELARPAVSGKNTIICAPTGSGKTFVALLI
CDNHLQNMPKEQKGKIVFLATKVPVYEQQKKVFTQHFERTRYKVAGISGETAGDVSSASV
IEGNDIIVLTPQILVNGLKDGTVPSLAIFTLIIFDECHNTTGNHPYNVLMTSYLNLKFDS
AAKQLPQIVGLTASVGVGSAKTLEETIEYICTLCACLDIQVISTIRENTQELEEIVYRPQ
KSFRLVGKRPKNHFMDIISVLMSETEALASKIYPIDALSHIKSKRFGTQCYEQWIVDTQK
KCRMLQLPDKEEEKRICRALFIYTEHLRKYNDALIINEDARTQDALAYLTEFFNDIRSGG
FDEIDQQLTANFEAKQQELREASVDELNENPKLEELTFILNEEYRLKPETRTLLFVTTRA
LVSALKKWIDENPTLSYLKPDALMGRSKRNQQTGMTLSNQKGVLDSFKTNGDSKILITTA
VADEGIDIAQCNLVLLYEYSGNVTKMIQVRGRGRAKDSKCILVTSKSEVAENERNNIYKE
EMMNKAIKQLQEWDEEKFARKINDLQNKEKTLRDSRKREIKQKPLEGNRQLLCGKCRAYA
CNTEDIRVIETSHHTVLDALFRERFLTKPHKKPNRYDHFEKKCKMYCREPKCQHDWGITV
RYKAFDDLPVIKIESFVVKDVTTSKLAVFRKWREVDFAMREFDINEMSSTE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggttattactgtgtcattggtcttcatcacgcatgagagatttacagtacttctcctt
tctacagtagctggtgtaactcttaaggagtatgtcagcagcaaccagagctggagctgc
tatgagagaaccaatcattttatcttgtattggtttctatctgatgccagagagagaatt
cagactgaggaacagaagaagggtctgactgctgcagcggctctctttgttgactctata
ctgcagctcgaatcagaaggatggtttcggggatttctagatgcactgaatgaagcaggt
tacaccggtctgagggaagcaattgaaaactgggatttccaaaaacttgaaagcctggag
gagcatcgacagctgctgaaacgtatagaagctacaatgagagacattgatgcagaacag
ataattccttacttaaacacttgtctcatagaccgagaatgtgaagagattcagcaggtc
aaagaactgaaaggcagaatggctggtgcagtaaagctcattgaatgccttgctaggtca
gacaaggagaactggcccaaaacctttcatctggctctagaacgagcaggatatgaccca
gttagcaaactttggaatatgaaagaaggtaacgataaagagatggatgttgaaatgatg
gaggaccagaatgggaacagtagtgccttagacataaatgtacagtattccgaagaagca
gaagttcccaatttcagtggaagtccatgttctccttcagaagtgtctcaacaatctact
tatggaccaaagaaggctagaagttatcagactgagcttgcccgacctgctgtcagtggg
aaaaatacaatcatatgtgctcctactggatctgggaaaacctttgtggcacttctgatt
tgtgacaatcatcttcaaaacatgcccaaggaacagaaagggaagattgtctttctagct
actaaagttccagtatatgaacaacagaaaaaagtcttcacacaacactttgaaagaact
aggtacaaagttgcggggatttctggggaaacggctggggatgtctcgtcagcaagcgtc
attgaagggaatgatatcattgtcttgacacctcagatccttgtgaatggtctcaaagat
ggaaccgttccttcccttgccattttcacattgattatatttgacgagtgccacaacacc
actgggaatcacccctataatgtgttaatgaccagctacttgaatcttaaatttgactcc
gctgcgaaacagctgcctcagattgttggcttaacagcctcggtcggagtgggcagtgcc
aagacccttgaggagacgatagaatacatctgtaccctctgcgcctgcctcgacatacaa
gtcatatctaccatcagagagaacacacaagaactggaggagattgtatacaggccccaa
aaatctttcagactagtcgggaagcgccccaaaaaccactttatggacattatctcagtc
ctgatgtctgaaactgaggccctggcaagcaagatttacccaatagatgcgttgtcccac
attaagagtaaacgtttcggaacgcagtgctatgaacagtggatcgttgacactcagaag
aagtgcagaatgttgcaactgccggataaggaagaagagaagaggatttgtagagctctt
tttatttacactgaacacttacggaaatacaatgatgccctcatcatcaacgaagatgca
cggactcaggatgcattggcctacttgactgagtttttcaatgacattagaagtggtggg
tttgacgagatagatcaacagttaacagcgaactttgaagctaaacaacaggaactgaga
gaggcctcagtagatgaactgaatgagaatcccaaactggaggagctcaccttcatcctg
aatgaagaataccgcctgaagccagagacccgcacccttctctttgttaccacaagagct
ctagtgtctgctttgaagaaatggattgatgagaatcctacactcagctacctaaaaccg
gatgcattgatggggcgtagcaaaagaaaccagcagacagggatgacactctcaaatcaa
aagggtgtactggactcgttcaaaaccaatggcgacagtaagatactaataaccacagct
gtcgcagatgaagggattgatattgctcagtgcaacctggttctcctctatgaatactct
ggcaacgtcaccaaaatgatccaagtccgaggtcgcggaagggcaaaagacagcaagtgc
atccttgtgacaagcaaaagcgaagtggctgagaacgagaggaacaatatctataaggag
gagatgatgaacaaggccatcaagcagctgcaggagtgggatgaggagaagttcgcaagg
aagataaatgacttgcaaaacaaggaaaagacactgcgagattccagaaagagagaaata
aaacaaaagcccctggagggcaatagacagttgctctgtgggaagtgcagagcatatgcc
tgtaatacagaagacatcagggtaatagagacttctcaccacactgtcttagatgccctg
tttcgggaacgttttctaacaaagcctcacaaaaaaccaaaccgctatgaccactttgag
aagaaatgcaaaatgtactgccgggagcccaagtgccagcacgactggggaatcacagtg
aggtacaaggcattcgatgacctccctgtaatcaaaattgaaagctttgtggtgaaggat
gttacaactagtaaactcgcagttttccggaaatggagagaggtggattttgcaatgagg
gaatttgacataaatgaaatgtccagcacagagtga
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