Mauremys reevesii (Reeves's turtle): 120409017
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Entry
120409017 CDS
T07797
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03018
RNA degradation
mrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120409017 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
120409017 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120409017 (LSM3)
03041 Spliceosome [BR:
mrv03041
]
120409017 (LSM3)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120409017 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
120409017 (LSM3)
Spliceosome [BR:
mrv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
120409017 (LSM3)
Complex C
U2 snRNP components
120409017 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
120409017
NCBI-ProteinID:
XP_039402273
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All DBs
Position
LG7:106157763..106164650
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AA seq
102 aa
AA seq
DB search
MADEVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagtggaccagcaacaaacaacaaatactgtagaagagccactggatctg
atcagactcagtcttgatgaacgaatctatgtgaaaatgaggaatgaccgagaacttcga
ggcagattacatgcttatgatcagcacttaaatatgattttgggtgatgttgaagagacc
gtgacgacaatagagattgatgaggaaacctatgaagagatttataaatctaccaagagg
aatattccaatgctctttgtgagaggtgacggcgttgtgcttgtagctcctccattgcgg
gttggctga
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