Mycobacteroides salmoniphilum: DSM43276_00369
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Entry
DSM43276_00369 CDS
T06041
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM43276_00369 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msal03400
]
DSM43276_00369 (pdg)
Enzymes [BR:
msal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM43276_00369 (pdg)
DNA repair and recombination proteins [BR:
msal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM43276_00369 (pdg)
Prokaryotic type
DSM43276_00369 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QCH22133
LinkDB
All DBs
Position
356322..357002
Genome browser
AA seq
226 aa
AA seq
DB search
MNRTLAQAFPHVYCELDFTTPLELTVATILSAQCTDVRVNMVTPALFAKYRTAEDYAGAN
RTELEEMIRTTGFYRNKANSIIGLGTQLVERYGGEVPPRLKDLVTLPGIGRKTANVVLGN
AFDIPGITVDTHFGRLVRRWGWTEEEDPVKVEHIVGELIERKEWTLLSHRVIFHGRRVCH
ARKPACGVCVLAKDCPSYGLGPTDPELAAPLVKGPETEHLLALAGL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcaccctggcgcaggcatttccacatgtctactgcgaactcgatttcaccacg
ccgctggaattgacggtcgccaccatcttgtcggcgcaatgcaccgacgtccgggtcaac
atggtgacccccgcgttgttcgccaagtaccgcactgccgaggactacgccggggccaat
cggaccgaactcgaggaaatgatccgtaccaccggtttctaccggaacaaggcgaactcg
atcatcgggctgggaacccagctggtggagcgatacggcggtgaagtgccgccgcgcctg
aaggacttggtcaccctgcccggcattggccgtaagacggcaaacgttgttctgggcaac
gcctttgacatcccgggcatcaccgtcgacacgcattttgggcggctggtgcggcgttgg
ggatggaccgaggaagaggacccggtcaaggtcgagcacatcgtcggcgagctcattgag
cgcaaggaatggaccttgctcagtcatcgggtgatcttccacggtcggcgcgtatgtcat
gcccgtaagccggcctgcggggtgtgcgtactggccaaggattgtccgtcatacggattg
ggcccgacagatcccgagctggcggcgccgctggtgaagggtccggaaaccgagcacttg
ctggccctggccgggttgtga
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