Micropterus salmoides (largemouth bass): 119882483
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Entry
119882483 CDS
T07309
Symbol
trpc6b
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119882483 (trpc6b)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119882483 (trpc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Motif
Other DBs
NCBI-GeneID:
119882483
NCBI-ProteinID:
XP_038548451
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MKTQGGTQGEWSNEGRAIMQQQVVAKSRRQALQRAGYLCHAQSSSCLSMTEELFLYAAEY
GNIPQVKRMLEELPDLNVNCVNYMGQNALQLSVANEHLEVTKLLLRKKDLARIGDALLLA
ISKGYIHIVEAILSHEAFADGKRLTNSPSQVETHDDFFAYDEDGTRFSRDITPIILASQC
HEYEIVHILLMKGAYIERPHDYFCQCKICTQQQRNDLFSHSLSRINAYKGLASPAYLSLS
NEDPVMAALELGNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVKAILNGD
AESCQISETFGRQNLLRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGVRQQTTAVKIL
LVLGVAVGMPVLAFMCWIAPSSKLGKLMCGPFLKFVAHAASFMIFLCLLVLNAADRFDGT
SLLPNMTTHDHPSQLFRMKTTPFTWMEILIISWVIGKIWEECKDIWSQDIREYISEPWNL
LDFSILAIFMTSFVARLMAFWHAYSAQCYVDKHYTDLSNVTLPSEIQYFQLARINWVSSD
PQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFITVFVAFMV
GMFTLYSYYLGAKHNDAFTTLEESFKTLFWAIFGLSEVKSVVINIDHKFIENIGYVLYGV
YNIIMVIVLLNMLIAMFNSSFQEIEDDADVEWKFARTKLWFSYFEHGGTLPVPFNLVPSP
MSVVSLWLGIREYFWDVPQGKSKENSKDEMELNKLRQQENLSAEASLCPTRHQKTMNHLI
KRYILKAQRDKDNDEVKEGELKEIKQDISSLRYELLERGNHDMDTLAKLIGQLGEVMHVQ
QKXELCYTNMHY
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccaaggtgggacgcagggagagtggagcaatgaagggagagccatcatgcag
cagcaggtcgtggccaaatcccggcgacaagctttacagagagctggttacctgtgtcat
gctcagtcctcttcctgcctttccatgacagaggaacttttcttatatgctgcagaatat
ggcaacattcctcaagtgaagcggatgctggaggagctgccagacctcaatgtcaactgt
gtgaactacatgggccagaatgcattgcagctgtcagttgccaatgaacatttagaggtc
actaagctacttcttaggaagaaagacctcgctagaataggagatgctttgctgttagcc
atcagtaaaggctacatccatatagtggaggccatactgagtcacgaggcctttgcagat
ggtaagaggctgactaacagtcctagccaggtggagacacatgatgacttctttgcttat
gatgaggatggcacacgtttctctcgtgacatcacacccatcatcctggcttcccagtgc
catgaatatgaaatcgtgcatatccttcttatgaaaggggcctatatagagcggcctcat
gactacttctgccagtgcaagatctgcacccaacagcagaggaatgacttatttagccat
tcactgtcccgcatcaatgcatataaaggtctggccagtccagcatatctgtcactatcc
aatgaagaccctgtgatggcagcattggagctgggcaatgagcttgcagttctggccaac
attgagaaggagttcaagaatgattacaagaaactgtccatgcagtgtaaagactttgtg
gtgggactcctagatttgtgtcgaaacacagaggaagtgaaggctatcttaaatggggac
gctgaatcatgtcaaatttctgaaacctttggcagacaaaaccttctcaggttaaaactt
gcaataaagtatgaagttaaaaagtttgtggcacatccaaactgccaacagcaacttctg
tccatctggtatgagaacttgtctggagtacgtcagcaaaccacagccgttaaaatcctt
cttgtccttggtgtagctgttgggatgcctgtcctggcttttatgtgctggatagcacca
tcaagtaagttagggaaacttatgtgtggacctttcctgaagtttgtggcccatgcagct
tcctttatgatattcctttgcctactggtcctaaacgcggcagaccgatttgatggaaca
tcgctgctgcctaacatgaccacccatgatcacccctcacaactgtttcgtatgaagacc
acccccttcacctggatggagattctaatcatatcctgggtcatagggaagatctgggaa
gaatgtaaagatatttggtcgcaagacatccgggaatacatttcagaaccctggaacctt
cttgattttagtattttggccatttttatgacctctttcgttgccagattaatggctttc
tggcatgcatattctgcacaatgttatgttgacaagcactatactgacctgtccaacgtg
actttgccctctgagatacagtatttccagttggctcgaatcaactgggtgtcctcagat
ccgcagcttatttctgaaggcctctatgcaattgcagttgtgctgagtttctctcgcatt
gcatacatcctgcctgccaatgagagctttgggcctttgcagatctcactgggaagaaca
gtaaaagacatctttaagttcatggtgattttcataacagtttttgtggctttcatggtg
ggaatgttcactctgtactcatactacctcggagccaagcacaacgatgcctttacaacg
ctcgaagagagttttaaaaccttattttgggccatttttggcttgtcagaggtgaaatca
gtggtcattaacattgaccataagttcattgagaatattggctatgttctgtacggggtg
tacaacatcatcatggtgattgtcttgctgaatatgctcattgccatgttcaacagctcc
ttccaagaaattgaggacgatgctgatgttgagtggaagtttgccagaactaagctctgg
ttctcgtactttgagcatggtggcacactgcctgtacccttcaacctcgtacccagcccc
atgtctgttgtttccctttggctggggataagggaatatttctgggatgtacctcaaggc
aaaagtaaagaaaattcaaaagatgagatggagcttaacaagctgaggcaacaggaaaat
ctgagtgcagaagcatccctttgtccaacacgtcatcaaaaaacaatgaatcacctcatc
aaaagatacatcttaaaagcacaaagagataaagacaatgacgaagtaaaggagggtgaa
ctgaaagagatcaaacaggacatctccagtctccgctatgagctgctggagaggggaaac
catgacatggacacactggcaaagctcatcgggcaactgggagaagtcatgcatgtccag
cagaaataagagctctgttacactaatatgcactactga
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