Micropterus salmoides (largemouth bass): 119883456
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Entry
119883456 CDS
T07309
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03272
Virion - Hepatitis viruses
msam04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119883456 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119883456 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119883456 (ldlra)
Membrane trafficking [BR:
msam04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119883456 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
hEGF
EGF
Muc_B2
Motif
Other DBs
NCBI-GeneID:
119883456
NCBI-ProteinID:
XP_038550032
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MHLPVGLNNMGRPRYASLLFLICSLVQTNALTTCGTKQFQCGNGKCISARWVCDGTDDCG
DGTDELPGTCPPKQCTDTEFRCRNGQCVSSSFVCDNKADCDDGSDEASCPPVTCSATSFQ
CNNTVCLPRLWACDGDADCSDGSDEWPQNCGTKTLDTVATNHCSSLEFRCGSGECIHGSW
KCDGGVDCPDRSDEADCDALTTCGTKQFQCGNGKCISARWVCDGTDDCGDGTDELPGTCL
TKTCRPTEFSCADRLNQCVPSTWHCDGKADCENGADEESCAPKQCTDTEFRCRNGQCVSS
SFVCDDEADCDDGSDEASCPPVTCSATSFQCNNTVCLPRLWACDGDTDCSDGSDEWPQNC
GTKTLDTAATNHCSSLEFRCGSGECIHGSWKCDGGADCLDRSDEADCARSTCRPDEFECG
DGTCIHGSLQCNHQYDCKDMSDETGCVNGMYLLPYPSSPDRYQPNELQTLHLCLQLNLYF
SCTATHCEGPTRFKCRSGECISMEKVCNKRRDCRDWSDEPLRECGSNECLYNNGGCSHIC
NDLKIGYECLCPAGYRLVEKKRCEDIDECANPDTCSQICINQIGSYKCQCEEGYQVDPAT
RACKAIGTIAYLFFTNRHEVRKMTLDKSEYTRVIPRLKNVVALDMNMATKEIYWSDISQK
KIYRAQMDSAEDSTHHSVVVGNDIDAPEGIAFDWIHGNLYWTDSIHRTVSVVNADGSHRK
TLFHQDLSKPRSIVVDPHTNFIYWTDWGNPAKIERAGLNGGDRTALVSDNIVWPNGITID
LLNQRLYWVDSKLHTLSSIDVQGGARRTLIIDENKLAHPLGLTVFEERVFWTDVSNNAIL
SANRLTGGDITPLAEHLSSPEDIILYHNLKQPAGRDWCQVSSCEFLCLAAPQVGRHPPKY
TCVCPDNMMLARDMRSCVPAVPTPAAPVQPQVPATNSPHRPPVPASTTPKPQARTTTVPI
IITSTAAKPVPRTTKPPVRSTTPEPRTPSPQPMKPKILQTTTEAPVTSPDFHQGFAAAIP
DTASTTPVALYIVLPLAIICLVAVGSVLLWRNYRQKNTNTIHFDNPVYQKTTEDQVHIWR
SHSPDGYSYPKRQVVSLDEEAVNPAFMEN
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttccagtggggctgaacaacatgggacggccgcgttatgcgtcattgttgttt
cttatctgctcccttgttcagacaaatgcattgacaacatgtggaaccaagcagttccag
tgtgggaatgggaaatgcatctcagcgagatgggtgtgtgatggcacagatgactgtgga
gacggcacagatgagcttcctggtacctgcccgccaaagcagtgcacagacacagagttc
cgctgcaggaacggacaatgcgtgtcatcctccttcgtgtgtgacaacaaggctgactgt
gacgacggcagcgacgaggcctcctgcccgcccgtcacctgcagcgccacgtccttccag
tgtaacaacaccgtttgtcttccacgcctgtgggcctgcgacggagacgccgattgctca
gacggctcggacgagtggccccagaactgtggtacaaagacacttgacactgttgccact
aatcactgctcatccctggagttccgctgtggcagcggcgaatgcatccacggcagctgg
aagtgtgatgggggagttgactgccccgatcgatcagatgaagctgactgtgatgcattg
acaacatgtggaaccaagcagttccagtgtgggaatgggaaatgcatctcagcgagatgg
gtgtgtgatggcacagatgactgcggagacggcacagatgagcttcctggtacctgcctt
accaaaacgtgtagaccgacagagttcagctgcgcggaccgccttaaccagtgtgtacca
agcacctggcactgtgatggaaaagctgactgtgagaatggagctgacgaagagagctgt
gcgccaaagcagtgcacagacacagagttccgctgcaggaacggacaatgcgtgtcatcc
tccttcgtgtgtgacgacgaggctgactgtgacgacggcagcgacgaggcctcctgcccg
cccgtcacctgcagcgccacgtccttccagtgtaacaacaccgtttgtcttccacgcctg
tgggcctgcgacggagacaccgattgctcagacggctcggacgagtggccccagaactgt
ggtacaaagacacttgacactgctgccactaatcactgctcatccctggagttccgctgt
ggcagcggcgaatgcatccacggcagctggaagtgtgatgggggagctgactgcctcgat
cgatcagatgaagctgactgtgctcgttccacctgccgtcctgatgagtttgaatgtggt
gatggcacttgcatccatgggagcctccagtgcaaccatcaatacgactgcaaggacatg
agtgatgaaactggctgtgtcaatggtatgtatctcctgccttacccttcctctcctgat
cgttaccagccaaatgaactgcaaactctccatctgtgtctacaactgaatctttatttc
tcatgcacagcaacccactgtgagggcccaaccaggtttaagtgccgcagtggggaatgt
attagcatggagaaagtgtgtaacaagcggcgtgactgcagggattggtcagatgagcct
cttagggaatgtggctctaatgagtgtctgtacaacaacggcggctgctcacatatttgc
aatgacctgaagatcggctatgagtgcctgtgtcctgctggataccgcctggttgaaaaa
aaacgctgtgaagatatcgatgagtgtgccaacccggacacctgcagccagatctgcatc
aaccagataggcagttacaaatgccaatgtgaggagggttaccaagttgacccggcaacc
agagcctgcaaggccatcggtacaatagcctaccttttcttcaccaaccgtcatgaagtc
agaaagatgactttggacaaaagtgagtacaccagagtaatccctcgtctaaagaacgtt
gtggctctcgacatgaacatggccaccaaagagatctactggtcggacatctctcaaaag
aagatctacagagctcagatggactcggctgaagactccactcatcacagcgtggtcgtc
ggtaatgacattgatgctcctgaaggcatcgcttttgactggatccatggtaacctgtac
tggactgacagcattcacagaactgtctctgtggtaaatgctgacggtagtcaccgcaaa
actctcttccaccaagacttgtctaaaccccgctctattgtggttgacccccacaccaac
ttcatttactggactgactgggggaaccccgctaagattgagagggcaggtcttaatgga
ggagaccgcactgccctggtctctgacaacattgtctggcctaatgggattacaatcgac
ctgttgaaccagcggctctactgggtggactctaagctgcacaccctctccagtatcgac
gtacagggcggtgctcgacgcaccctcatcattgatgaaaacaagctggctcacccgctg
ggactgacagtgtttgaggaaagagtgttctggacagacgtcagtaacaatgccatcctc
agtgcaaacaggctgacgggtggtgacatcacaccacttgcggagcacctatcctcacca
gaagacattattctttaccataacctcaaacaacctgctggaagagattggtgccaggta
tccagctgtgagttcttgtgcctggcagctcctcaagtgggaagacatccccccaaatat
acatgtgtctgtccagataacatgatgctagcgagggatatgaggtcatgtgtacctgct
gtgccaacacctgcagctcctgtgcagcctcaagttccagctaccaactcccctcatcgg
ccaccagtgccagccagcaccacacctaagccccaggcccgcaccaccacagtgcccatc
ataatcaccagcaccgcggcaaagccagtgccacgcaccaccaagcctcctgtaaggagc
accacacctgaaccaagaaccccttcaccacagccgatgaagcctaaaattcttcagacc
accacagaggctccagtcacttctccagatttccaccagggatttgccgcagctataccc
gacactgcctccaccaccccagtggctctgtatattgtgttacctctggcgataatttgt
ctggtggctgttggcagcgtgctgctgtggaggaactacaggcagaagaacaccaacacg
attcactttgataaccccgtctatcagaaaaccactgaggaccaagtccacatttggagg
agccacagccctgacggttactcctacccaaaaagacaagttgtgagcttggatgaagag
gcagtcaatccagccttcatggaaaactga
DBGET
integrated database retrieval system
