KEGG   Micropterus salmoides (largemouth bass): 119884920
Entry
119884920         CDS       T07309                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03420  Nucleotide excision repair
msam04110  Cell cycle
msam04114  Oocyte meiosis
msam04120  Ubiquitin mediated proteolysis
msam04141  Protein processing in endoplasmic reticulum
msam04310  Wnt signaling pathway
msam04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119884920 (rbx1)
   04120 Ubiquitin mediated proteolysis
    119884920 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119884920 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    119884920 (rbx1)
   04350 TGF-beta signaling pathway
    119884920 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119884920 (rbx1)
   04114 Oocyte meiosis
    119884920 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119884920 (rbx1)
   03400 DNA repair and recombination proteins [BR:msam03400]
    119884920 (rbx1)
Enzymes [BR:msam01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     119884920 (rbx1)
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   119884920 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     119884920 (rbx1)
   Cul2 complex
     119884920 (rbx1)
   Cul3 complex
     119884920 (rbx1)
   Cul4 complex
     119884920 (rbx1)
   Cul7 complex
     119884920 (rbx1)
   Cul8 complex
     119884920 (rbx1)
   Cul9 complex
     119884920 (rbx1)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      119884920 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      119884920 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 119884920
NCBI-ProteinID: XP_038551134
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccaagtggcacaaacagtggagccagcaagaag
cgatttgaagtaaagaagtggaacgctgtggcgctgtgggcctgggacatcgtggtggac
aactgtgctatctgtcggaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttcggctacctctgaggagtgcactgtagcctggggtgtctgcaatcacgccttccat
ttccactgtatttctcgctggctgaaaacccgacaggtgtgccctctagacaacagggag
tgggagtttcagaaatatggacactag

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