Micropterus salmoides (largemouth bass): 119886351
Help
Entry
119886351 CDS
T07309
Symbol
tardbpb
Name
(RefSeq) TAR DNA-binding protein 43 isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119886351 (tardbpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119886351 (tardbpb)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119886351 (tardbpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
Motif
Other DBs
NCBI-GeneID:
119886351
NCBI-ProteinID:
XP_038552957
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAEVYIRVAEEENEEPMEIPSEDDGTVLLSTVAAQFPGACGLRFRSPVSQCMRGVRLVEG
VLHAPETGWGNIVYVVNYPKDNKRKMEEIDASSAVKMKRGDMKTSDLIVLGLPWKTTEQD
LKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFTEYEAQEKVISQRHMIDGRWCDCKLPN
SKVNMQGPDEPLRSRKVFVGRCTEDMTTDDLRQFFMQYGEVTDVFIPKPFRAFAFVTFAD
DQVAQSLCGEDLIIKGISVHISNAEPKHGNRQFDRTTRFGNGFGAQAFGSSRSGLGSSTN
SSLANFGSFSLNPAMMAAAQAALQSSWGMMGMLASQQQTSTSGSTSSGTSSSRDQSQSFS
TGNSNYGTSSASLGWGTGSNSTTSGSGFSSGFGSSMESKSSGWGM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtatacattcgagtggcagaggaggaaaacgaggaacccatggagatcccg
tccgaagacgatggcactgttctgctttccaccgtggcagctcagtttcctggggcgtgt
ggcctacggttcaggagccccgtgtctcagtgcatgcgaggagtgcgtcttgtggagggg
gtcctgcacgcaccagaaactgggtggggaaatatcgtgtatgtggtgaactatccaaaa
gacaacaaaaggaaaatggaggaaattgatgcgtcgtctgcggtgaaaatgaagcgagga
gacatgaagacatctgacctgatcgtactgggtcttccgtggaaaacaacagagcaggac
ctgaaagattactttagcacatttggagaagtcatcatggttcaggtaaaacgagatgcc
aagacgggaaactctaaaggatttggctttgtgagattcacagagtatgaggctcaagaa
aaggtgatctcccagcggcatatgattgacgggagatggtgtgactgcaagctccctaac
tcgaaggtgaatatgcaaggtccagatgagccattgaggagcagaaaagtgtttgtaggc
cgttgcacagaagacatgaccacagatgacctacggcagttcttcatgcagtatggagaa
gtcacagatgtcttcatccccaagccattccgtgcttttgcctttgtcacattcgcagat
gaccaggttgcccagtctctctgtggagaggatctaataatcaaaggcatcagtgttcac
atctcaaatgctgagcccaaacatggcaataggcagtttgatcgcaccacgcggtttggg
aatggctttggagctcaagcatttggtagcagccgtagtgggttagggagcagcactaac
agcagtctggcgaattttggttccttcagtctgaaccctgctatgatggctgctgctcag
gctgctctgcagagtagttggggaatgatgggcatgctggctagccagcagcagacatcc
acttcaggaagtacttccagcggaacaagctctagtagggaccagagtcagtctttcagt
acaggcaacagcaactacggcaccagctcagccagtcttggctggggaacagggtcaaac
tctacaacaagtggtagtgggtttagctcaggttttgggtccagtatggagtcaaagtca
tctgggtggggtatgtaa
DBGET
integrated database retrieval system
