KEGG   Micropterus salmoides (largemouth bass): 119888167
Entry
119888167         CDS       T07309                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
  KO
K06752  MHC class II antigen
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04145  Phagosome
msam04514  Cell adhesion molecules
msam04672  Intestinal immune network for IgA production
msam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119888167
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119888167
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119888167
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119888167
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119888167
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119888167
  Exosomal proteins of epithelial cells
   119888167
  Exosomal proteins of breast milk
   119888167
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta
Other DBs
NCBI-GeneID: 119888167
NCBI-ProteinID: XP_038554572
LinkDB
Position
Unknown
AA seq 260 aa
MCSHSFLFCVVFSLFSPVFSDEDYSQIRACCTFRGPGLEDVEYIITDTFNKKLMIQYNST
RGNWTGFTASAIGIEPSWNSDPDDARQRQFEKKSLCLDIIDYIQQIGNLTAVPTIKLNSM
KHPPMLVCSAYNFYPKQIRVMWLQNGQEVTSGVSSSEVMSDGDWYYQIHSYLEHTPTTGE
KITCVVEHFTLSEPALHVWDPSLPVPERIKIVVGLCGLMLGFVIVSSGFIYYKKKSAAFS
TLYQEQGSIPVEQLPAAGAT
NT seq 783 nt   +upstreamnt  +downstreamnt
atgtgcagtcacagttttcttttctgtgtggttttctctcttttcagtccagttttctca
gatgaagattattcacaaatcagagcatgctgtacattcaggggtccaggcttagaagat
gtagagtatatcattacagatacttttaacaagaaattaatgatccagtacaacagcaca
agaggcaactggacaggattcacagcctctgcaatcggaatagagccatcttggaacagt
gatcccgatgacgcaagacaaagacaatttgaaaagaaatcactgtgtcttgacatcata
gattacatccaacaaataggtaatcttacagctgtacccaccatcaagctgaattcaatg
aagcacccacccatgcttgtgtgcagtgcctataacttttatccgaaacaaatccgagta
atgtggttgcagaacgggcaggaagtgacctcaggtgtcagttcttctgaagtgatgtct
gatggggattggtattaccagattcattcctacctggagcacaccccgactacaggagaa
aaaattacctgcgtggtcgaacacttcaccctctctgaaccagcgcttcacgtctgggac
ccctcccttcctgtgccagaacggattaaaattgtagtgggactgtgtggtctgatgctt
ggttttgtgattgtgagctctggattcatctactacaagaaaaagtctgccgcattctcc
actctctaccaagaacaagggtcgattcccgtggaacaactccctgcagctggagcaact
tag

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