Micropterus salmoides (largemouth bass): 119888500
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Entry
119888500 CDS
T07309
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119888500 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119888500 (kdm2ab)
04121 Ubiquitin system [BR:
msam04121
]
119888500 (kdm2ab)
03036 Chromosome and associated proteins [BR:
msam03036
]
119888500 (kdm2ab)
Enzymes [BR:
msam01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
119888500 (kdm2ab)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119888500 (kdm2ab)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119888500 (kdm2ab)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119888500 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
119888500 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
LRR_6
Cupin_8
C1_1
LRR_8
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
119888500
NCBI-ProteinID:
XP_038555005
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLDEKLQCVRFSSDLIKHMEGKDF
TFEYIQREGLREPIIFDTTDGLGLQMPDSDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRTELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPSKFRYPFYYEMCWYVLERYLYCLTNISHLTPEFQKYSLGIG
LTQADLETNDNNGNGTSSGVDSGAENGEIKLKEENEIKEEDEPAQVTAPQQMLTPFELEG
LWNLYGKLEELPAHKKCVPAGIRNAAALLEDMRALLENHANDNPKLSYTGEPIVKWPARP
SWYHPPAPPPPVLYRPRLGPSLHKPLGQRSTKRSSISALRRRRVRCKRCAACCRKECGTC
QYCHDMRKFGGPGRMKKSCIMRQCLAPALPNTARCAICGEGESEESNPSAHSLMECSVCS
QIAHRQCIKDPGEGKINKDLPSCWECPKCYPGKDSEASESSSDEESGESEGSLPPSKLAY
REGIGVGEGVRRGRRSRPPSRPTAPPPSQKLLLQHQQNRKRASALELRLKKRIKLERSKI
LTKSSLDRSPRLLGSRVLSRLRSPTSRLSQGRGRGSTWASGSPYHSSSGGAGSVQQQQSS
LGLVLEPKGEPRRGRGRGVRLRGGGAGRGIRSGRSQHGELEEDESEDSSSSSNSSSSSDN
DEEWERRQNSGQGLDKENQPQSRRGGQAAKEGEEERGEVANQNGAEEEEVEQDSQTGGKD
GSHLKVTLQKPTKAKRDPSAIVPKLEAVAPQTATSTIHNQTRTLVRPPIRNCGPCPDQHS
NTPTPPHTRSGQTYTHTSHPKMAEASKRAKLSRPAKLSNGASCSSSSELPHLRIPLSALQ
GGGSEADREGGGNGPGCEREVWVSVFRYLSRADLCVCMAVCKNWYKWCLDKRLWARIDLS
IKRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLVGRLPGLKDLMLAGCSWSSISALC
SSGCPLLRSLDLRYADGVKDTQIRDLVTPPGCDNRSQLRTMQCLRLAGLDISDSTLRLVI
RHMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLTELNLGGCSKLTDSCLKYLRRLSF
ISLLDLRGCKSVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcatacacggtacagcaaacgcctgcgtacaggtacgcggcgccgctac
caggacgatggaatctcagatgatgaaattgaagggaaacgaacgtttgacctggatgaa
aagctgcagtgtgtcaggtttagctctgacttgatcaaacacatggagggcaaagatttc
acatttgaatacatccagagagaagggctcagggaacccattatttttgacacaactgat
ggccttggcctacaaatgccagactctgatttcagtgtgagcgatgtcaagttgtttgtt
ggtagtcgacgcattgtagacgtgatggatgtgaacacgcagaagggaatagagatgtca
atggctcagtggcgacgctactatgagacgccaccttcagaaagagagaaactctacaac
gtcatcagcctggagttcagccacacgagactggagaatctggtcaaacgaccggcttcg
gtggaccttattgactgggtggacaacatgtggccccgccacctcaaggagagacagaga
gactctactaatgccatcatagacatgcattatcccaaagtacaaaagtactgtctcatg
agtgtgcagggctgcttcacagatttccacattgactttggtggcacttcagtctggtac
cacatcctgcgaggaggaaaggtgttctggctgattccacccacaccacagaacctggag
atgtatgagaactgggttttatcaggaaaacagggagacatcttcctgggggacaagtgt
catgactgtcagaggacagagctcaagcaggggaacaccttcataatcccatcaggttgg
atccatgctgtgtacaccccagaggacacgttggtgtttggggggaatttcctccacagc
tttaacatccccatgcaactcaacatctacagcattgaggatcgcacacgggtgccatca
aagttccgctatccattctactatgagatgtgctggtatgtcttggagagatacctctac
tgtctgaccaacatttctcacctcactcctgagttccagaaatattccctaggcatagga
ctgacccaagctgatcttgaaaccaatgataacaacgggaatggcacctccagtggagtt
gacagtggtgcagaaaatggggagataaagttaaaggaagaaaatgaaatcaaagaagaa
gatgagccagctcaagttacagcacctcagcagatgctgactccctttgagctagaggga
ctgtggaacctctatgggaagctggaggagctgccagcccacaaaaagtgtgtccctgca
ggcatcaggaacgctgcagccctgctcgaagacatgagggctcttctggagaaccatgcc
aatgataaccccaagctatcctacactggcgagcccattgtcaagtggcctgcaaggcca
tcatggtaccaccccccagctccccctccccctgtcctttaccgtcctcgcttgggcccc
agtctccacaagcctctcggtcagaggtccaccaaacgctcttccatctctgccctgagg
cgcagacgggtgaggtgtaagcgctgtgccgcctgctgcaggaaggagtgtggcacctgc
cagtactgtcacgatatgaggaagtttggtggccctggacgcatgaagaagagctgtatc
atgagacagtgtctagcgcctgccttgccaaacacagcacgatgtgccatatgtggagaa
ggggaatcggaggaatcaaatccaagcgcgcactcactcatggagtgctccgtctgctca
cagattgcccatcgtcagtgcattaaggatcctggtgaggggaagatcaataaggatttg
cccagctgctgggagtgtccaaaatgttatccaggcaaagactcagaggcatcagagtct
tccagtgatgaggaaagtggagagtcagagggctccttgccaccttccaaacttgcatac
cgggaaggcattggtgtaggtgaaggggtgagacgagggagacgtagcagacccccatcc
cgacccacagcaccaccaccttctcagaaactgctactgcagcatcaacagaaccgcaaa
agagcaagtgcactggagcttagacttaagaagaggataaaactggagcgcagcaaaatc
ttaacgaagtcgtctctagatcgttctcccaggctgctgggctccagggtgctgtcccgg
ctgcgctctccaaccagcagactgtctcagggcagaggccggggctccacctgggcaagt
ggctccccttaccacagctcttcaggaggggccgggtccgtccagcagcagcagtcttcc
ctcggtctggtacttgagcccaagggagagccccgcagagggaggggcagaggggtgagg
ctgcggggaggaggagcaggaagaggaatcagaagcggtagaagccaacatggagagttg
gaggaggatgagagtgaggacagcagcagcagcagcaacagtagcagcagcagcgacaac
gatgaggaatgggagagaaggcagaacagtgggcaagggttggataaagagaaccagcca
cagtcgaggcgaggaggacaggcagccaaagaaggagaagaggaaaggggtgaggtggcc
aaccaaaatggtgctgaggaggaagaggtggagcaggacagtcaaacggggggcaaagat
ggctcgcatcttaaagtgacactccaaaagcccaccaaggccaagcgggacccatcagcc
attgtccccaaattagaggctgttgcccctcaaactgccacttccacaatacacaaccag
accagaacccttgtcagaccccccattagaaattgcggcccctgtcctgatcaacactcc
aatacccccacaccaccacacactcgcagtggacagacatacactcatacctcccaccca
aagatggcggaggcctctaaaagagcaaagctgagcaggcctgctaaactgagcaatggt
gcctcatgttcttcctcctctgagcttcctcatctccgcatccctctgtccgccctgcag
ggaggagggagcgaggcggacagggagggcggtgggaacgggccgggctgtgagagggaa
gtgtgggtgtctgtcttccgctacttaagtcgagctgatctctgcgtctgcatggctgtc
tgcaagaactggtacaaatggtgtttagacaagcggctttgggcacggattgaccttagc
atcaaacgcaccgttactccacaggccctaacaggcatcataaagagacagccagtcacg
ctcgatctctcttggaccaacatctctaaaaaacagctgaactggcttgttggccgtctg
cctgggctgaaggatctgatgctggcaggttgttcctggtcatctatttcagctctctgc
tcctctggttgccctctcctccgttccctggacctgcggtatgcagatggggttaaagac
actcagatcagggatctagtcacccctccaggctgtgacaatcgcagtcagctgcggacc
atgcagtgtctgcgactagcaggcctggacatcagcgactccactctgcgcctggtgatc
cgccatatgccccatttaacaaaactggacctctcccactgcaacagtctcaccgaccac
tccatcaacctgctgactgcagtgggctcgtctacccgaaacacgctcacagagctcaac
ctgggaggctgcagtaaactgacagactcatgtctgaagtatctccgccgcctctctttc
atctcactgctcgacctgcgaggctgcaaaagcgtctcccgcaaggcctgtgaggccttc
atctccgagctgtctgtcaacacgctctactgcctatcagatgaaaaactgatccagagg
atatcctaa
DBGET
integrated database retrieval system
