Micropterus salmoides (largemouth bass): 119889243
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Entry
119889243 CDS
T07309
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119889243
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Protocadherins
119889243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Mfa2
Motif
Other DBs
NCBI-GeneID:
119889243
NCBI-ProteinID:
XP_038556089
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MTKRMGYRDWRWLTLWWHHFFLLWSTINGQTRYSIPEELELGSMVGNLAKDLGLGLSDIF
DRKLRVASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVIENPLQLHRIE
VEIRDVNDNAPSFLKNDHIIEIAESTVVGVRFPLESAEDSDVGSNGLKTYTLSKDECFTL
KVKEIENGRKIPELVLNKSLDREKKAVHNLFLTAVDGGNPVKSGTSKITVNVLDINDNVP
LFENALYKIAVQENRTNGSFVITTKATDIDEGPNGEIEYSLGIHTPPSVQSLFHIDAVTG
DIFLKNQLDHETQASYRIDISAKDKGLPKMEGHCNVQVDVLDVNDNAPEIVLTSKPTSVP
EDSRSGTVVALLSVRDLDSGDNGKVTLQLPKRSPFTLKPSFSNNYALVTSGALDRESFSE
YNIEITATDSGSPPLSSKKIIPVSITDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDASLFTVNLYTGEVRTKRAASEQDDSSQRLLIEIKDDGEPVQSST
VTVSILLEDGLHEPILDLRQKAAEPSKKTGRITLYLILSLASVSVLSLLTFLILAVKCIR
NSRSSGSCCTRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggcttactctttggtggcatcatttc
tttctcttgtggagtacaataaacggacagactcgttacagcatcccagaagaactggaa
ctgggctctatggttggaaatctagccaaagatctgggtttgggactatctgatattttt
gaccgtaaattgcgtgtcgcctctgaggctggtgagcagtatttcagcgtggatgcgggg
aagggcgagctggtggtgaatgacagaatagacagagaggctttatgcggacaaagcgct
agctgtgtgttgcctctgcaagtagtaatagagaacccgctacagttacaccggatagaa
gtggaaataagagacgtaaatgacaacgctcccagttttctcaaaaacgatcatataata
gaaattgctgaatccaccgttgtaggtgtgcgttttcctttagagagtgcagaggattct
gatgtaggaagtaacggattaaagacttatacactaagcaaagatgagtgcttcacttta
aaagttaaagaaattgaaaatggacgaaaaattccagaattggtgttaaataaatcatta
gaccgcgagaaaaaagccgttcacaatttatttcttactgctgtggatggaggcaatccg
gtcaagtctggaacttcaaaaataactgtgaatgtgcttgatattaatgacaatgtgcca
ttattcgaaaatgctttatataaaattgctgttcaagaaaacagaacaaatggctccttt
gtaattacaacaaaagcaacagacatagatgagggtccaaatggagaaattgagtactcg
cttggtatacacacaccaccatcagtgcagtcattgtttcatatagatgctgtgacggga
gatatatttttgaaaaaccagctggaccatgaaactcaagcctcatatcgaatagacatt
agtgcaaaagacaaaggcttgcctaagatggagggtcactgcaatgtgcaggtggatgtc
ttagacgttaatgataacgctcctgaaattgttctgacttcaaaacccacttcagtgccc
gaagactctcgcagtgggacagtggtggctttactcagcgtccgtgaccttgattccggt
gataacggtaaagtgacgttacaacttcccaaacgttctccctttactcttaaaccatca
ttttctaataattacgcgctggttaccagtggtgctttagaccgagagagtttctcagag
tataatattgagataacagccactgattcaggctctcctcctctctctagtaagaaaatt
atacctgtcagcatcactgatgtgaatgacaaccctcctgtcttcactcagccctcctat
aatgtatatttaaaagagaacggggtaccagggtctatactgtactcagtatcagcatct
gacctggattttggtgaaaacgccaaaatctcttactctatactggactctaaagtgcag
gacgtgtctgtctcatcttatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggaccag
ggctctccgtctctcagcagcaacgccaccgtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctcctccgctgccctgggctccctctctcaccagagg
atgccccgctccgctaaagcgggtcacctggtcacaaaggtgacggctgtggacgctgac
tcgggccataacgcctggatctcctacagactggcggaggccacagacgcctctctgttc
actgtcaatctgtacacaggggaggtgaggactaaacgcgctgcgtccgagcaggacgac
tcctctcagaggctgcttatagagatcaaggacgatggggaaccggtccagtcctccacc
gtcacggtgtccatcctgctggaggacggcctccatgagcccatcttagacctccgacag
aaagcggccgagcccagcaagaaaactgggagaatcaccctttatctgattctctctctg
gcctcggtgtccgtgctgtctctgctgacttttctcatcttagcggttaaatgcatcagg
aacagcagaagcagcggtagttgctgcacgagacggagcgactgtgatgattacaagaac
cccaacagaaacctgcagatacaactcaatactgacggacctataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgtatgtctccgatgtca
gagtacagtgatttcactttgattaaacccagcagcaccactgactttaaggaggtgatc
agtgttctggatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagc
agatga
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