KEGG   Micropterus salmoides (largemouth bass): 119889506
Entry
119889506         CDS       T07309                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04145  Phagosome
msam04514  Cell adhesion molecules
msam04672  Intestinal immune network for IgA production
msam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119889506
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119889506
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119889506
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119889506
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119889506
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119889506
  Exosomal proteins of epithelial cells
   119889506
  Exosomal proteins of breast milk
   119889506
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta C2-set_3 DUF3953 Ig_3
Other DBs
NCBI-GeneID: 119889506
NCBI-ProteinID: XP_038556337
LinkDB
Position
Unknown
AA seq 253 aa
MKRFMYLLFPCLFSLFLVDCAADGNGYFMYADFWCAVYSREQAQVEYLVDWYFNKEFMMQ
YNSTVGNWTGFTPAGLNTASMLNGDKYDILQRKIERQLICVNNVGLVLNITEENRAEPSV
TLVETTSSSHETMLVCSAYDFYPKYIKVAWHQNGQEVTSGVTVSDVMTNGDWTYQVHSYL
EYTPGRQDRVSCVVEHASLSEPKILDWDPSLNHSERSYLIGGVCALLLGAVFLSLGLIQY
KRKSCDPRFSNTL
NT seq 762 nt   +upstreamnt  +downstreamnt
atgaaacgcttcatgtacctgctgtttccatgtcttttctctctgtttttggtggattgt
gctgctgatggaaatggatacttcatgtatgctgacttctggtgtgcagtgtactccaga
gagcaggcgcaggtggagtatctggttgactggtattttaacaaagagtttatgatgcag
tataacagcacggtcgggaactggacgggcttcactccagctggattaaacactgcatca
atgttaaatggggacaagtacgacattctacagagaaaaattgagaggcagcttatttgt
gtcaacaacgttggtttggttttgaacataactgaggaaaacagggctgaacccagtgtt
actcttgtagagaccaccagctccagtcatgaaaccatgctggtgtgcagtgcttacgac
ttctaccctaaatatatcaaggttgcatggcaccagaatggacaggaagtgacctcgggc
gtgacagtaagcgatgtaatgacaaacggagactggacctatcaggtccactcttacttg
gagtacacacctggccggcaggacagggtcagctgtgtagtggagcacgccagcctcagc
gagcccaagatattagactgggacccttccttgaatcactctgagaggagctacctgatt
ggtggagtttgtgctctgctgttgggagcagtgtttctgtccttgggactgatccagtac
aagcggaaaagctgtgatccacgattttcaaacactttataa

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