Micropterus salmoides (largemouth bass): 119891286
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Entry
119891286 CDS
T07309
Symbol
kdm2ba
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119891286 (kdm2ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119891286 (kdm2ba)
04121 Ubiquitin system [BR:
msam04121
]
119891286 (kdm2ba)
03036 Chromosome and associated proteins [BR:
msam03036
]
119891286 (kdm2ba)
Enzymes [BR:
msam01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
119891286 (kdm2ba)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119891286 (kdm2ba)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119891286 (kdm2ba)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119891286 (kdm2ba)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
119891286 (kdm2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
PHD
C1_1
Motif
Other DBs
NCBI-GeneID:
119891286
NCBI-ProteinID:
XP_038558697
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MALSLSGDDDEYDSESEQQRAANRPKPKMGTSSAVKLPSNRSSSGARRRRTRCRKCEACL
RTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLEEEEDK
FNFMLMECSICNEIVHPKCLKVSDASGVVNDELPNCWECPKCNHAGKSGKVLKQKRGPGF
KYASNLPGSLLREQKPVKEEGDVSSAAKRRPDREETPKYRPEESLHRQPPLLSPCSLPRP
RPEDKLRKKRKLFDDDEEEDLSVRKKEKSDDPYFSRLLHQIKTEEDEDAYEEEDGEGREP
YFRSGIERKCRFGDAEDEGDDKDSRNELLNPCIKTPIGDSDQSHCSSPQAGPSSEGGSET
QDKGPRPKARRKRRLPNRELSRELSKALNQEIQKTEDCLANENRQPLKVEPETENEEPKR
LFRNSSELGDQRPHLKTKEMNGTPWELRHFYPSQITPLGFNRSTPTNRPVPPHSPPKCVQ
MERHVIRPPPISPPPDRLPLKDGKTHVIQREVWMKIFGYLTHQELCVCMRVCKTWNRWCC
DKRLWTKIDLNRCTSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRVLKLS
GCSWAAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVQD
LRLAGLDITDTSLRLISRQMPLLSNLDLSYCNHINDQSVNLLTAAGTTTRDSLTEINLSV
CNRVTDHSLNFFKRCGSICQIDLRFCKQVSKTACERFIAEMSVSVPFRLKEDKLLQKSS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtcattgagcggagacgatgatgaatatgattcagagtcagagcagcaacgg
gcagccaaccggccgaagcccaagatggggacgtcgtcggccgttaagctgccgtccaac
cgtagctcatccggagccagacggaggaggacacgctgccgaaagtgcgaggcgtgcctc
cggaccgagtgtggagagtgtcacttctgcaaggacatgaagaagtttggagggccgggg
cgcatgaagcagtcctgcattatgagacagtgcattgcgccggttctgccccacacggcg
gtgtgtgtggtgtgtaaagaggcagggaaagaggacacgctggaagaagaagaggacaag
ttcaacttcatgctgatggagtgctctatctgcaacgagatcgtccatcccaaatgtctc
aaggtgagcgacgcctcaggagtggtgaacgatgaactccctaactgctgggaatgtccc
aaatgcaaccatgctgggaaaagtggaaaagtattgaagcaaaaaaggggtccagggttc
aagtacgcgtccaacctcccaggctctctgctgagggaacagaagcctgtgaaggaggaa
ggggacgtttcttccgcagccaagaggagaccagacagagaggagacacccaagtacaga
cccgaggagtctctccacaggcagccaccactgctgtccccctgcagcctgcctcggccc
aggcctgaggacaaactgaggaagaagaggaagctctttgatgatgatgaggaagaggac
ctcagtgtgaggaagaaggaaaagtcagatgatccgtatttttccagacttctgcaccaa
atcaagacagaagaggatgaggacgcatatgaggaggaggatggtgaaggaagggagcct
tacttccggagtggtatagagaggaaatgccgttttggagacgctgaagatgaaggggat
gacaaggactccaggaatgaacttttgaatccctgtattaaaacgccaatcggagacagt
gaccagtctcactgcagctctccacaggcaggccccagcagcgagggcggaagtgagacc
caggacaaaggtccgcgtccaaaagctcgccgtaagcggcgtttacctaatagagagctg
agccgagagctgagcaaagcactgaaccaggaaatccagaagacggaggactgcctggcc
aacgagaaccgccaacccctcaaggtggagccggagacggaaaacgaggaacccaagagg
ttgttccgcaacagcagtgaacttggggatcagaggccccacctcaagaccaaagagatg
aacgggaccccctgggagctgcgccatttctacccgagtcagatcactccactgggcttc
aacaggagcaccccaaccaaccggccggtgcccccacactccccacccaagtgtgtccaa
atggagcggcatgtcattcgcccccctccaataagcccgcctcctgacaggctgccacta
aaagatggtaaaacacacgtcatacagcgcgaggtgtggatgaagatctttggctatctc
acacatcaggagctgtgtgtctgcatgagagtttgcaagacatggaacagatggtgttgt
gataagagactctggacaaagatcgatctgaaccgctgcacctccatcaccccactcatg
ctaagtgggattatccgccgacagccagtttccctggacctcagttggaccaacatttcc
aagaaacaattaagctggcttattaatagattgccaggcctgcgagtgttaaagttatct
gggtgttcctgggctgctgtttctgcactctgcacctccagctgcccgctgctgcgcacc
ttagatgtccagtgggtggaggggctcaaagacgcacagatgagggacctcctctcacca
cccacagacaacagaccaggtcaactggacaaccgctgcaagttgaggaacgtgcaggac
ctgcggctggcggggctggacatcactgacacgtctttacgtctcatcagccggcagatg
cctctgctgtccaatctggacctgagctactgcaaccatatcaacgaccagtcagtcaac
ctgctgacagcagcaggaaccacgaccagagactccctcacagaaattaacctgtcagtt
tgtaaccgggtcactgaccattccctaaacttcttcaagcgttgtggaagcatttgtcag
atcgaccttcgcttctgcaagcaagtgtccaaaacggcctgcgaaaggttcatcgcagag
atgtctgtgagcgtaccgtttagactgaaggaggacaaactgctgcagaagtcgagctag
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integrated database retrieval system
