KEGG   Micropterus salmoides (largemouth bass): 119891830
Entry
119891830         CDS       T07309                                 
Name
(RefSeq) actin, cytoplasmic-like
  KO
K05692  actin beta/gamma 1
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03082  ATP-dependent chromatin remodeling
msam04145  Phagosome
msam04210  Apoptosis
msam04510  Focal adhesion
msam04520  Adherens junction
msam04530  Tight junction
msam04810  Regulation of actin cytoskeleton
msam04814  Motor proteins
msam04820  Cytoskeleton in muscle cells
msam05100  Bacterial invasion of epithelial cells
msam05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119891830
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119891830
  09143 Cell growth and death
   04210 Apoptosis
    119891830
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119891830
   04520 Adherens junction
    119891830
   04530 Tight junction
    119891830
  09142 Cell motility
   04814 Motor proteins
    119891830
   04820 Cytoskeleton in muscle cells
    119891830
   04810 Regulation of actin cytoskeleton
    119891830
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119891830
   05100 Bacterial invasion of epithelial cells
    119891830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msam03021]
    119891830
   03019 Messenger RNA biogenesis [BR:msam03019]
    119891830
   03036 Chromosome and associated proteins [BR:msam03036]
    119891830
   03029 Mitochondrial biogenesis [BR:msam03029]
    119891830
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:msam04812]
    119891830
   04147 Exosome [BR:msam04147]
    119891830
Transcription machinery [BR:msam03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119891830
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     119891830
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     119891830
    NuA4 complex
     119891830
  Chromatin remodeling factors
   BAF complex
    119891830
   PBAF complex
    119891830
   GBAF(ncBAF) complex
    119891830
   SWR1 complex
    119891830
Mitochondrial biogenesis [BR:msam03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    119891830
Cytoskeleton proteins [BR:msam04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     119891830
Exosome [BR:msam04147]
 Exosomal proteins
  Proteins found in most exosomes
   119891830
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 119891830
NCBI-ProteinID: XP_038559664
LinkDB
Position
Unknown
AA seq 375 aa
MEDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNCPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASSSSTLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPAIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagacgatgttgctgccctcgttgttgacaatggctctggcatgtgcaaggctggt
ttcgctggagatgacgccccccgtgccgtcttcccatcaattgttggccgtcccagacac
cagggtgtgatggtgggaatgggacagaaggacagctatgttggagatgaggcacagagc
aagagaggcatcctgaccctgaagtaccccatcgagcacggcatcgtcaccaactgggat
gacatggagaagatttggcatcacaccttctacaatgagctccgtgttgctcctgaggag
catccagtcctgctgactgaggcgccactcaaccccaaggccaacagggagaagatgaca
cagatcatgtttgagaccttcaactgtcctgccatgtatgtggccatccaggctgtcctg
tccctgtacgcctctgggcgtaccacaggtattgtgatggactccggtgacggtgtcagc
cacactgtgcccatctatgagggttatgctctgcctcacgccatcctccgtctggacctg
gctggcagggatctgactgactatctgatgaagatcctcactgagagaggctacagcttc
accaccaccgctgagcgtgagattgtgcgtgacattaaggagaagctctgctatgtggct
ctggacttcgagcaggagatgcagacagcatcttcctcttccacactcgagaagagctac
gagcttcctgatggacaggtcatcaccatcggcaacgaaaggttccgctgtcccgagact
ctcttccagccttcattcattggaatggagtcggctggcatccatgagacgacctacaac
agcatcatgaagtgcgacgtggacatccgtaaagacctgtacgccaacactgtgctgtct
ggcggcaccaccatgtaccctggcatcgctgaccgcatgcagaaggagatcactgccctg
gccccacccaccatgaaaatcaagatcattgctcccccagagaggaagtactccgtctgg
atcggcggttccatcctggcctccctctccactttccagcagatgtggatcagcaagcag
gagtacgacgagtctggcccagccatcgttcaccgcaagtgcttctag

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