Micropterus salmoides (largemouth bass): 119891830
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Entry
119891830 CDS
T07309
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
msam04145
Phagosome
msam04210
Apoptosis
msam04510
Focal adhesion
msam04520
Adherens junction
msam04530
Tight junction
msam04810
Regulation of actin cytoskeleton
msam04814
Motor proteins
msam04820
Cytoskeleton in muscle cells
msam05100
Bacterial invasion of epithelial cells
msam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119891830
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119891830
09143 Cell growth and death
04210 Apoptosis
119891830
09144 Cellular community - eukaryotes
04510 Focal adhesion
119891830
04520 Adherens junction
119891830
04530 Tight junction
119891830
09142 Cell motility
04814 Motor proteins
119891830
04820 Cytoskeleton in muscle cells
119891830
04810 Regulation of actin cytoskeleton
119891830
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119891830
05100 Bacterial invasion of epithelial cells
119891830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119891830
03019 Messenger RNA biogenesis [BR:
msam03019
]
119891830
03036 Chromosome and associated proteins [BR:
msam03036
]
119891830
03029 Mitochondrial biogenesis [BR:
msam03029
]
119891830
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119891830
04147 Exosome [BR:
msam04147
]
119891830
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119891830
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
119891830
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
119891830
NuA4 complex
119891830
Chromatin remodeling factors
BAF complex
119891830
PBAF complex
119891830
GBAF(ncBAF) complex
119891830
SWR1 complex
119891830
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
119891830
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
119891830
Exosome [BR:
msam04147
]
Exosomal proteins
Proteins found in most exosomes
119891830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
119891830
NCBI-ProteinID:
XP_038559664
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MEDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNCPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASSSSTLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPAIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatgttgctgccctcgttgttgacaatggctctggcatgtgcaaggctggt
ttcgctggagatgacgccccccgtgccgtcttcccatcaattgttggccgtcccagacac
cagggtgtgatggtgggaatgggacagaaggacagctatgttggagatgaggcacagagc
aagagaggcatcctgaccctgaagtaccccatcgagcacggcatcgtcaccaactgggat
gacatggagaagatttggcatcacaccttctacaatgagctccgtgttgctcctgaggag
catccagtcctgctgactgaggcgccactcaaccccaaggccaacagggagaagatgaca
cagatcatgtttgagaccttcaactgtcctgccatgtatgtggccatccaggctgtcctg
tccctgtacgcctctgggcgtaccacaggtattgtgatggactccggtgacggtgtcagc
cacactgtgcccatctatgagggttatgctctgcctcacgccatcctccgtctggacctg
gctggcagggatctgactgactatctgatgaagatcctcactgagagaggctacagcttc
accaccaccgctgagcgtgagattgtgcgtgacattaaggagaagctctgctatgtggct
ctggacttcgagcaggagatgcagacagcatcttcctcttccacactcgagaagagctac
gagcttcctgatggacaggtcatcaccatcggcaacgaaaggttccgctgtcccgagact
ctcttccagccttcattcattggaatggagtcggctggcatccatgagacgacctacaac
agcatcatgaagtgcgacgtggacatccgtaaagacctgtacgccaacactgtgctgtct
ggcggcaccaccatgtaccctggcatcgctgaccgcatgcagaaggagatcactgccctg
gccccacccaccatgaaaatcaagatcattgctcccccagagaggaagtactccgtctgg
atcggcggttccatcctggcctccctctccactttccagcagatgtggatcagcaagcag
gagtacgacgagtctggcccagccatcgttcaccgcaagtgcttctag
DBGET
integrated database retrieval system