KEGG   Micropterus salmoides (largemouth bass): 119891954
Entry
119891954         CDS       T07309                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2 isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msam03400]
    119891954 (ercc6l2)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    119891954 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C VIGSSK
Other DBs
NCBI-GeneID: 119891954
NCBI-ProteinID: XP_038559898
LinkDB
Position
Unknown
AA seq 1574 aa
MASVSAVEKATWREGDRCLAPDPKDGTLRETTIQRLTSHNGDTIAWVVVKDPSKDEEEEE
AVPVSKLMRPGSNHFTKEKPVFPSSSTDPRLCVPLELSNVDEDRVPYTINRYLRDYQREG
IRFIYNNYIRSRGCVLGDDMGLGKTVQVIGFLAAVLHKTGTWEDIKNNRPQFLQSQMPSK
QSKPNKVFLIVAPLSVLYNWKDELDTWGHFQCVVVHGLRKEDELARIKKGRIEIALTTYE
TLRLCLDQFNIIDWSAVVVDEAHKIKNPNSQITQAMKDLKCKIRIGLTGTILQNNLEELW
CVMDWAIPGCLGSLGHFKNKFSDPIEQGQRHSATKRALATGRKTVRALVRKISQWFLRRT
KALIKEQLPKKDDRVVYCSLTDFQQTVYQAVLDTDDVTLLLRSSEKCDCQSGRTRRSCCY
RTNSEGVKMKELYFSYLAILRKVANHVALLQTTAGTSKKQEKYVGGVCAKVFQKFPDFVQ
RCKGEAFEALSDPMYSGKMKVLQKLLSYYLQKRDKVLLFSLSTKLLDVLESYCMAEGLDY
SRLDGTTKAKERIQIVKEFNSSSHINICLVSTMAGGLGLNFVGANVVVLFDPTWNPASDL
QAIDRAYRIGQCRDVTVLRLISLGTVEEVIYLRQVYKQQLQCSVVGKESARRYFEAVQGH
GIYKGELFGIRNLFRLQIEGTCLTRKILEREGQVESGVMTTSTHTGEEKEEAAKGVSEPG
DVLPTDGPVANDEPAKEYRDPSKVPRGVLDFSSGSEEDEEERGLKRKVLNPGAEDGNRGG
NSATGPGRMSLLQYGFSKLLERVKGKPELGEGDSSSGVEEGPSEEYAEDQKRDGTSSAIC
KSSFTGNGVVCPHKLGMKIWDASSSDRKDGENRSGGRGGNVSLVKQSDEAIREGQYLKGW
TNKKITVDEESDENPSPDKKNPNKLKMTVPKAHHFEDYSDESEDLDIEALTGPERVALNS
HVRRGDRERGKLDRERKKQSVSVRDKARSKYTENIEIFTSSEDEHTPVKKGRSTGCHLTS
PLTERSTVELPSPASKGKDGTIDIVLGNVQEVVYTHSNQRVVGGSKAEELISRAAVRDVF
ERKMYSQLPANHLLGTQESLSLSQPDSEPWPSAVTREKPRVDHPVNFTSTSVHHTRHTTF
IIGETPQAIQRQQLEEMAEKFKFPTVHQFAVEILRRNSTQRLAWLRQYYTSLNHPDLANT
VTNSFPQADSVQISTSSSTAASSTCATKSHADTRTPEKDVLKAKKKRKCTRKNPEPKTKP
EVPQNNNVSLPQKKSRIPQNHVPEPETKPTKPQNDVLEPEKPLRDVPSLESEEQEETVWG
ARGHKRTKRGSVSSSGAFRAGGGLGLDQAGSSGLGSGEAAAFLSRTDRDTPSSRALSHSR
STILSKPTAQGWEQEQNLSCRTSETSQGLGGKPQTPSPPEPATSTSNHSSFLTDLIGDTS
ILDDLLKPKSRGGQQRIAPKTPPALSSVSISTYLTTPCPSGITLSTDSGSAGRIDFLSSP
KSSTAPTHEAVSKGSRKDFWDLLNEGNEESINRLTDPAEVQRVCINTNLAARSRSAEEKS
KSLWKTNEKFLWKK
NT seq 4725 nt   +upstreamnt  +downstreamnt
atggcttcagtttctgcagttgaaaaagcaacatggcgtgaaggtgaccgttgtctggct
cctgacccgaaagacggcacccttcgagaaaccactattcagagactgacctctcataat
ggtgacaccatagcatgggtggtcgtcaaagaccccagtaaagatgaagaagaggaggaa
gctgtacctgtctcgaaactcatgagaccaggctcaaatcacttcaccaaggagaaacct
gtgtttcccagcagcagcacagaccccaggctatgtgtccccttagaactgagtaatgtc
gatgaagacagagtcccctacaccatcaacagatacttgagggattaccaaagagaaggt
atcaggtttatttacaacaactacatccgctccagaggttgcgtcttgggggacgacatg
ggcttgggaaaaactgtacaggtcattggttttcttgctgcagtgttgcacaaaacaggc
acatgggaggatatcaagaacaacaggcctcagtttctgcagagtcagatgccctccaag
caaagtaaacccaacaaagtgttcctcattgtggccccactgtcagtgctttataactgg
aaagatgaactggacacatggggtcacttccagtgtgtggtggtccacgggctgaggaaa
gaggacgagctggctcgcatcaagaagggacgcattgagattgccctcactacctacgag
actctgcgcctttgtctggatcagtttaatatcatagactggtctgcagtggttgtggat
gaggcccacaagattaaaaatccaaattctcagatcacccaggccatgaaggacctgaaa
tgcaagatcaggattggcctcactggcaccatcttacagaacaaccttgaggagctgtgg
tgtgtcatggactgggccatacctggttgtcttggcagcttaggacatttcaagaacaag
ttttcagatccaattgagcaagggcagaggcacagtgcaactaaacgtgccctagctaca
gggaggaagactgttagagccctggtgaggaagatttcccagtggttcctcagaaggacg
aaagctctcatcaaggaacaactgcctaagaaggacgacagggtggtgtattgctctctg
acagactttcagcagactgtgtatcaggcagtgctggacactgacgatgtgacgttgctg
ttgaggtcttcagagaaatgtgactgtcaaagtggacgcacccgcagaagctgctgctat
agaacaaactcagaaggtgtgaaaatgaaggagctgtactttagttacttggccatattg
aggaaggttgccaaccatgtagccctgcttcagaccactgcaggcaccagcaagaaacag
gaaaagtatgtgggtggcgtctgtgcgaaggttttccaaaagtttcccgactttgtgcag
agatgcaaaggtgaagcatttgaggccttgtcggacccgatgtacagtggaaagatgaag
gttttgcagaagctcctgtcatattatctgcaaaagagagataaagtgctgcttttttct
ctctcaaccaagctgttggatgtgctggagagctactgcatggcagaggggctggactac
agcaggttggacggaaccacgaaagccaaagagagaattcagattgtcaaagagttcaac
agctcttctcacatcaacatctgcctggtttctaccatggcgggcggtcttggtcttaac
tttgtaggggccaatgtggtagtgctatttgaccccacatggaacccagccagtgacctc
caagccattgaccgggcataccgcattggccagtgcagggatgtgactgttcttaggctg
atctcactggggactgttgaggaggttatctacctcagacaagtttacaaacagcaattg
cagtgctcagttgtgggcaaggagagtgcacgccggtacttcgaggcagtgcaagggcac
ggtatctataagggagagctgtttgggatcagaaacctcttcaggctgcagatcgaaggg
acatgcctcacccgcaagatactagagcgagaaggacaagtggagtccggtgtaatgaca
accagcactcacacaggcgaagagaaggaggaggcggcgaagggagttagcgaacctgga
gatgttctgcctacagatggccctgtagcaaatgatgaaccagccaaggagtatagagat
ccatcaaaggtccccagaggggtgctggacttcagcagtgggagtgaggaggatgaggag
gagcgggggcttaagaggaaggtgctaaaccccggtgcagaggacggcaacaggggtggg
aattctgccactggtcctggtcgaatgagtctcctccaatacggtttctccaaactcctc
gaaagagtcaaaggaaaaccagagttaggagaaggggacagtagctcaggtgttgaagaa
ggcccctcggaggaatatgctgaggatcaaaagagggacggtacctcctctgccatctgc
aagagctccttcacaggaaatggtgtagtctgtccccataaattgggaatgaaaatctgg
gatgccagcagttcagacagaaaagatggggagaacagaagtggggggagaggaggaaat
gtttctctagttaaacagagtgatgaggctataagagagggacagtacctgaaagggtgg
acaaataagaaaattacagtggatgaagagagtgatgaaaatccctcaccagacaaaaag
aatcctaacaagctcaaaatgacagttccgaaagcgcaccactttgaggattattcagat
gaatccgaggatttggacatagaggcattgacggggcccgagagggtcgctttaaattca
cacgttagacgaggagacagagagagaggaaagctagatcgtgagagaaagaagcaaagt
gttagtgtcagggacaaagccagatccaaatacacagagaacatagagatattcacatct
tcagaagatgaacacactcctgttaagaaaggaagatctacaggatgtcacttaacgtct
ccactgacagaaagatccacagtggagttgccatccccagcatccaaaggaaaggatgga
actatcgacattgtgctagggaacgtacaggaagtggtgtatacacactcaaaccagcgc
gtggtgggtgggagcaaagcagaggagctgatcagtagagctgctgtacgagacgtgttt
gaacgcaagatgtactctcagctcccggccaatcaccttctcggcacccaggagagcctg
tcattgagccaaccagacagtgagccatggccttctgctgtcacacgggagaagcccaga
gtggaccatccagtcaacttcaccagcacaagtgtgcaccacacccgacataccaccttc
atcatcggagagactccccaggctatacaaaggcagcagctggaggaaatggcggaaaaa
tttaaatttcccacagtccatcagtttgcagtggagattctgagaaggaactcaacccag
agactggcctggctacgacagtattacacttcactgaaccatcctgacctggctaatacg
gtcacaaacagcttcccacaggctgactcagtacagatctctacctcctcttcaactgct
gcatcctcaacatgcgccacaaaatctcacgcagataccagaaccccagaaaaggatgtt
ctaaaagccaagaagaagcgtaaatgcactcggaagaatccagaacccaaaacgaagcct
gaagtcccacaaaataataatgtttctttgccacagaaaaagtctagaatcccacaaaat
catgttccagaacctgagacaaagcctacaaaaccacaaaatgatgttctagaaccagag
aaacctctcagagatgttccaagccttgagtcagaggagcaggaggagacagtctggggt
gccagaggacataagaggacaaagaggggtagtgtttctagttctggagccttcagagct
ggtggtggtcttggcttggatcaggccggcagcagtggtctggggtctggggaggctgct
gcttttctgagtcgcacagacagagatactccttcttctcgggccctcagccatagcagg
tccaccatattatccaaacccacagcacagggatgggagcaagagcaaaacttgtcttgt
aggaccagcgaaacttctcaaggcctcggaggaaaacctcagaccccttcccctcctgag
ccggccacatctacctccaatcacagttccttcctcacagacctgataggagacacctca
atcctcgacgatttgttaaaacccaaatccaggggtggacaacaaaggatcgccccaaaa
acacctcctgccctctcctctgtgtcaataagcacatatctcaccacaccctgtccatcc
ggaatcaccctcagtactgattcaggttcagcaggccgcatagactttctgtcctctcca
aagtcaagcacagcccctacacacgaggcggtatccaagggcagtcgcaaagacttctgg
gacctcctgaatgagggtaatgaggagagtatcaacaggttaacggacccggcagaagtg
cagagggtttgcatcaacactaacttagcagcaagaagtaggtctgcagaggagaagagt
aagagtctctggaagactaatgaaaagttcctgtggaagaaataa

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