Micropterus salmoides (largemouth bass): 119892335
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Entry
119892335 CDS
T07309
Name
(RefSeq) actin, cytoplasmic-like
KO
K05692
actin beta/gamma 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
msam04145
Phagosome
msam04210
Apoptosis
msam04510
Focal adhesion
msam04520
Adherens junction
msam04530
Tight junction
msam04810
Regulation of actin cytoskeleton
msam04814
Motor proteins
msam04820
Cytoskeleton in muscle cells
msam05100
Bacterial invasion of epithelial cells
msam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119892335
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119892335
09143 Cell growth and death
04210 Apoptosis
119892335
09144 Cellular community - eukaryotes
04510 Focal adhesion
119892335
04520 Adherens junction
119892335
04530 Tight junction
119892335
09142 Cell motility
04814 Motor proteins
119892335
04820 Cytoskeleton in muscle cells
119892335
04810 Regulation of actin cytoskeleton
119892335
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119892335
05100 Bacterial invasion of epithelial cells
119892335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119892335
03019 Messenger RNA biogenesis [BR:
msam03019
]
119892335
03036 Chromosome and associated proteins [BR:
msam03036
]
119892335
03029 Mitochondrial biogenesis [BR:
msam03029
]
119892335
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119892335
04147 Exosome [BR:
msam04147
]
119892335
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119892335
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
119892335
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
119892335
NuA4 complex
119892335
Chromatin remodeling factors
BAF complex
119892335
PBAF complex
119892335
GBAF(ncBAF) complex
119892335
SWR1 complex
119892335
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
119892335
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
119892335
Exosome [BR:
msam04147
]
Exosomal proteins
Proteins found in most exosomes
119892335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
119892335
NCBI-ProteinID:
XP_038560463
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MEDDVDVLVLDNGSGVFKAGFARDDAPRAVFPSIVGRPKHQAVMVGMGQKDSYVGDEAQS
KRSILKLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMI
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHAVPIYEGNALPHAILRLDL
AGRDLTDYLMKILTERGYSFTSGAEREIVLDIKEKLCYVALDFEQEMQTAASSSTLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIRMEAAGIHEMTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIIAPPERPYSVWIGGSILGSLSTFQQRWISKQ
EYDESGPYIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgacgtcgatgtcctcgttttggacaacggctccggcgtgttcaaggccggt
tttgcccgagatgacgccccccgcgccgtcttcccgtccattgtcggacgccccaaacac
caggctgtgatggtgggaatgggacagaaggacagctacgtgggagacgaagcccagagc
aagagaagcatcctgaagctgaagtatcccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatttggcatcacaccttctacaacgagctccgtgttgctcctgaggag
catccagtcctgctgaccgaggctccactcaaccccaaggccaacagggagaagatgata
cagatcatgtttgagaccttcaacagtcctgccatgtatgtggccatccaggccgtcctg
tctctgtacgcctccggtcgtaccacaggtattgtgatggactccggtgacggtgtcagc
cacgctgtgcccatctacgagggtaacgctctgcctcacgccatcctccgtctggacctg
gctggaagagatctgactgactatctgatgaagatcctcactgagagaggctacagcttc
acctctggtgctgagcgtgagatcgtgcttgacattaaggagaagctctgctacgtggct
ctggacttcgagcaggagatgcagacggcagcttcctcttccaccctggagaagagctac
gagcttcctgacggacaggtcatcaccatcggcaacgagaggttccgctgccccgagacg
ctcttccagccttcattcatcagaatggaggcagctggcatccacgagatgacctacaac
agcatcatgaagtgcgacgtggacatccgtaaggacctgtacgccaacactgtgctgtcc
ggcggcaccaccatgtaccccggcatcgctgaccgcatgcagaaggagatcaccgctctg
gccccacccaccatgaaaataaagatcatcgctcccccagagagaccgtactctgtctgg
atcggtggctccatcctgggctccctctccactttccagcagaggtggatcagcaagcag
gagtacgatgagtccggcccctacattgtccatcgaaagtgcttctag
DBGET
integrated database retrieval system