Micropterus salmoides (largemouth bass): 119892880
Help
Entry
119892880 CDS
T07309
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119892880 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119892880 (eftud2)
Spliceosome [BR:
msam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119892880 (eftud2)
Complex C
U5 SnRNP specific factors
119892880 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
119892880
NCBI-ProteinID:
XP_038560808
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLDAEDRDVDEGDDDDDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNSLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVHHIPSPQEGARNKIEHTYTGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctatatgacgagtttgggaactacatcggcccagagctggactctgac
gatgatgaagatgatcttgatgcagaggacagagatgttgatgagggtgatgatgacgat
gatgatgagcctgctgatgctgatgacgatgtcccgggtatggaggtggtcctgcatgag
gacaagaagtactatcctacagcagaggaggtttatgggcccgaagtggaaactattgtc
caagaggaagacacacaacctctcacagagcccatcatcaagcctgtgaagaacaagcag
ttcactctgatggagcaggagttgcctgcaactgtttatgatatggagttccttgcagat
ttgatggacggtcctgagctaatccgtaatgtaaccctgtgtggtcaccttcaccatggc
aagacctgttttgtggactgcctgattgaacagacacacccagaaatcaggaagagagat
gatgtggatctccgatacacggacatcctctttacagaacaggagaggggagttggtatc
aagagtacacctgtcacaatggtcctgccagactccagaggcaaatcctaccttttcaac
atcatggatacaccaggccacgtgaacttctctgatgaagtcacgtctagcatccggatc
tcagacggtgttgtcctcttcatagatgcagcagaaggagtgatgctgaacacagagcgt
ctgatcaaacatgcagtccaggagcgtatggccataaccatctgcatcaacaaagtggac
cggctcattgtggagctcaaactgcctcccacagatgcttattataaacttcgccacatc
gtggatgaggtcaatagtttgctaagcacgtactccacagatgagaacttggtagtgtct
cctctccttggaaacgtgtgctttgccagctctcagtacagtatctgtttcaccctgggg
tcttttgcaaagatctactccgacacctatggtgacatcaactataatgagtttgccaag
aggctttggggtgacatttatttcaaccccaaaacccgcaagttcacaaagaaagccccc
agcagtaactctcagcgcagctttgtggaatttgtcctggagcctctctacaagatcctc
tcacaggtggttggagatgtggacacatctctccccagagttctggatgagctggggatc
cacctgactaaagaggaactgaagctgaacatcagacctttgttgaggctggtctgtaac
cgcttctttggagagttcactggctttgtggacatgtgtgtacatcacatcccctcacca
caagagggtgctaggaacaagatagagcacacatacacaggcggtttggactcagacctg
ggggaggccatggcagagtgtgaccctgatggtcctttgatgtgccacaccactaagatg
tacagcacagaggatggtgttcagttccatgcgtttggcagggtgctgagtgggaccatt
caggcaggccagcccgtcaaggttttaggagagaactacacccttgaagatgaggaggac
tcccaggtctgcactgtgggccgtctctggatttcagttgccagataccaaattgaagtg
aacagagtgcctgctggcaactgggttctcatcgaaggttgcgaccagccaatcgtcaag
acagccacaatcacagagcccagagggaacgaagaggctcagattttcagaccgctgaag
ttcaacacagcatcagttataaagattgcagtggagcccgtcaacccatcagagctaccg
aaaatgttggacggactgaggaaggtcaacaagagctatccatctctcaccacaaaggtg
gaggagtctggagagcatgttatcttagggacaggagagctctacctggactgtgtcatg
catgacctgcgcaagatgtactctgagatcgacattaaagttgctgaccctgtggtgact
ttctgtgaaaccgttgtagagacatcatcgctcaagtgctttgctgaaacgcctaacaaa
aagaataagatcaccatgattgctgagcccttggaaaaggggctggctgaggacatagag
aacgaagtggtgcagatcacgtggaacaggaagaagctgggagaatttttccagacaaag
tacgactgggatctgctggctgccaggtctatctgggccttcggaccagacaccacggga
ccaaatatccttgtagacgacacactgccctctgaggtggacaaggcgctgctcggctca
gtcaaagacagcatcgttcagggcttccagtggggcaccagggaggggcctctgtgtgat
gagcccatcaggaatgtcaagtttaagatccttgacgcagtcattgcccaggagcctctc
cacagaggaggaggccaggtcatccctacagcgaggagagtggtgtactccgcttttctc
atggccactccgaggctgatggagccctattactttgtggaggttcaggctccagctgat
tgtgtatctgctgtctacacagtgctggctcgaagaaggggtcatgtcacccaagatgca
cctattcctgggtctcctctttacaccattaaggctttcatcccggccatcgactccttc
ggctttgagactgatcttcgtacacatacacagggtcaggcctttgcgctgtctgtgttc
catcactggcagatcgtccctggtgaccctctggacaagagtattgtgatccggcctctt
gagcctcaacctgcaccccaccttgccagagagttcatgatcaagacccgaaggcgcaag
ggtctgagcgaggatgtgagcatcagcaagttcttcgacgatcctatgttgttggagctg
gccaaacaggacgtggtgcttaactaccccatgtga
DBGET
integrated database retrieval system
