Micropterus salmoides (largemouth bass): 119894164
Help
Entry
119894164 CDS
T07309
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119894164 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119894164 (tdg.2)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
119894164 (tdg.2)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119894164 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AT_hook
TFIIA
Motif
Other DBs
NCBI-GeneID:
119894164
NCBI-ProteinID:
XP_038562654
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MLIYSNKSTVKMEENQYTSLTVPTDYFQQWYQSSQQHPEAQYVMPYHNMGHYTEGPRDDL
VMAELSVHREPPLYQDPLYQNCPPAQNHYQDLTYQQNVREQQQQQPPAHQHHPQHQHTVQ
QQEQSVQHQPQPAGPPQVVTPVKKKRGRPPKQQAEDGKAQEEEDEIEAAKKAKRALNRFN
GMSVAEVMAKTLPDVITYNLDILIIGINPGLLSAFKGHHYPNPGNHFWKCLFLSGLTDQQ
LNYMHDQSLPENYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLQKYKPLIAAFNGK
GIYEIFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKL
KELRDQMKGLAPSHEVEETQYSFDLQLAKEDAKRLAIKEEQVDPEYESCSVLHDDVRQSS
NTSN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttaatttattcaaataagtcaacagttaagatggaagaaaaccagtatacatcattg
acggttcccacggattattttcagcagtggtaccagtccagccagcagcatcctgaggcg
cagtatgtaatgccgtatcacaacatgggccattacacagaaggtcccagagatgatctc
gtcatggcagagctgtctgtccaccgggagccccctctttatcaggaccctctttatcag
aactgtccccctgcccaaaatcactaccaggacctgacctaccagcagaacgtcagggag
cagcagcagcagcagcctcctgcacatcagcaccaccctcagcatcaacatacagtacag
cagcaggagcagagtgttcagcaccaacctcagcctgccggtccacctcaagttgtgaca
ccagtgaagaagaagagaggccggcctcctaagcagcaggcggaggacggcaaggcgcag
gaagaggaggatgagattgaggccgccaaaaaagccaagagggctctcaaccgctttaac
ggcatgtcagtggctgaggttatggccaaaaccctgccagacgttattacctacaatctt
gacattttgataattggaattaacccaggactattgtcagccttcaaaggacaccattac
ccaaacccaggaaaccatttctggaaatgtctgtttctttccggtctaactgaccagcag
ctcaactacatgcatgaccagagtctgccagagaattatagcatcggcttcaccaacatg
gtagagaggactacacctggcagcaaggatctctccagtaaggagattcgtgaaggaggc
cgacagttacttgacaagctgcagaaatacaagccattaatagcagcttttaatggaaaa
ggtatttatgaaatcttctgcaaagaaacatttggtgtgaaggcgaagaatctcgagttt
ggtctacagccctacaaaattccagaaactgaaaccgtgtgctacttgatgccatcatca
agcccccgctgtgcccagtttcctcgagcacaggataaggtgcatttctacatcaagctg
aaggaactgcgagaccagatgaaaggcctggcacccagccacgaggtggaagagacacag
tactcgtttgatctgcagctagctaaagaggatgctaagaggcttgcaattaaagaagag
caggtggatccagagtatgaaagctgcagtgtgctgcatgatgacgtgaggcaaagcagc
aacacctccaactaa
DBGET
integrated database retrieval system
