Micropterus salmoides (largemouth bass): 119895701
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Entry
119895701 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119895701
Peptidases and inhibitors [BR:
msam01002
]
Metallo peptidases
Family M10
119895701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_5
Reprolysin_4
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
119895701
NCBI-ProteinID:
XP_038564902
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MRSCSRCIVLSLAVAVYCGPVSQVAVQDERFAESYLKKFFNLKEETGPTVRQLISPVSNK
LREMQRFFGLKVTGTLDADTLEMMKKPRCGVPDVNMARFSTFGENLKWTTNSLTYRIENY
TPDMPVSEVDDSIEKALQVWAKVTPLRFTRIYSGTXDIMISFGRQHGDYYPFDGPDGTLA
HAFVPGPGIGGDAHFDEDETFTFHSNDGYILFMVAAHEFGHSLGLSHSHDPGALMYPMYS
HRNPDTFVLPRDDVNGIQSLYGPNPDKDPVNPGPEPPTTPDACDPTMVLDAVATLRGEML
FFKDSFFWRSYYQSATPEQILIKNFWPSAPVNIDAAYESQQSDSVLLFKGQKVWAFSGYD
PVPGYPKSLTSFGLPGNVRKIDAALYDEESGKTLFFVGNKYYSYDEAKRTMDQGFPKRVA
RTFPDLPSKVTAAFQYRGYAYIYSGPYMFEYHLRTKTFYRELTNSYFLPCSNF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttgcagtcggtgcatcgtgctaagtttggcagtagcagtttactgcgggcca
gtatcacaagttgctgtgcaagatgaacgttttgcagagagctacctgaagaaattcttc
aacctaaaagaggagacaggtccaactgtcagacagctaatcagcccagtgagcaataag
cttagagagatgcagcgattctttggtctcaaggtcactgggacgctggatgctgatacc
ttagagatgatgaagaagccccgctgtggcgttccagatgtcaacatggccaggttctcc
acttttggagaaaacctcaagtggactacgaacagccttacctacaggatagagaactac
acacctgacatgccagtgtcagaggtcgatgactccatagagaaggcactgcaggtttgg
gccaaagtcactcctctgagattcacaagaatctacagtggcacgnctgacatcatgatc
tcctttggccgccagcatggtgattattacccctttgatggtcctgatggcactcttgcc
catgccttcgtcccaggacctggaattggaggagatgctcattttgatgaagatgaaacg
ttcactttccactcaaacgatggctacatcctcttcatggtggctgcccatgagtttggc
cactccctgggcttgtctcactctcatgatcctggtgctctcatgtacccaatgtactca
cacagaaaccctgacacctttgttctgccccgggatgatgtcaacggcattcagtctctc
tatggtccaaaccctgacaaggaccctgttaatcctggacctgagcctccaaccacccct
gatgcctgtgatccaaccatggtcttagacgctgtcgccaccctgcgaggagagatgctc
ttcttcaaagacagtttcttctggcgtagctactaccagagtgcgacaccagagcaaatt
ctcatcaaaaacttctggcccagtgcccccgtcaacatcgacgctgcttatgaaagccaa
caatcagacagcgtcttactcttcaaaggtcagaaagtgtgggctttcagtggctatgat
cctgtacctggctatcctaaaagtcttaccagttttggactgccaggaaacgtgaggaaa
atcgatgcagcgctctatgatgaggaatctggcaagactctgttctttgtaggcaacaag
tactacagttatgatgaggccaaaaggactatggaccagggattccccaagcgtgtggct
cggaccttcccagaccttcccagcaaggtgactgcagctttccagtacagaggttatgct
tacatctacagtggaccctacatgtttgagtaccacctgaggacgaagacgttctaccgt
gagctgacgaacagctacttcttgccctgcagtaacttctag
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