Micropterus salmoides (largemouth bass): 119895825
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Entry
119895825 CDS
T07309
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
msam04510
Focal adhesion
msam04540
Gap junction
msam04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119895825
04020 Calcium signaling pathway
119895825
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119895825
04540 Gap junction
119895825
09142 Cell motility
04810 Regulation of actin cytoskeleton
119895825
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
msam01001
]
119895825
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
msam04090
]
119895825
Enzymes [BR:
msam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119895825
Protein kinases [BR:
msam01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
119895825
CD molecules [BR:
msam04090
]
Proteins
119895825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
Ig_6
C2-set
Stevor
Haspin_kinase
TMEM154
Motif
Other DBs
NCBI-GeneID:
119895825
NCBI-ProteinID:
XP_038565108
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MASIKGRTGSLNMLHFLLGVLLVPPEGVISLELQPSSSEVLINSNSNFTVVCSGWSQVTW
QLPLDSQVDGVIVENQGSSSILQLYNATWRNSGRYTCEESSSSQSREIDIFIPGQGPEEW
FIPLGRGVVMKDAEEDTIPCVVSDPRLNVSLYERPGRTPVTRMTYEPGRGFTGRLNDTSY
VCLASRGDEERESQVYYVFSIVVPKVMEVDLEVSSSVLKQGEVLTVNCTVKDTDVVYFSW
DFPRRQEIEPVTDFLPHRIRSFVNISAATVEDSGVYVCTVKEKVQEQTVVKNITVTVLDQ
GYVYLWPLGEPNVSSLLHHTVDFRVEIDAHPAPTVLWTKDNQTAATETTFVNTTHLTGSR
YMSTLTLVRVQMNQTGRYTATVSNDDDEEEIVFNLEVTAPPRITSLSEVGGKAVLCISEG
APPPSVNWYTCHSSHRCSNLMGGWRNLSAAVEGGALRENVTEVEKRGVTQVRSVLTLESL
TSLSAVRCEAKNSAGQRARDLRILSNSLLSQVAVLAVVLVLVVLAVVFLIILILLWRKKP
RYEVRWKVIESVSADGQQYTYVDPAHLPYSSTWEVPRDSVVLGQVLGSGAFGRVVEATVS
GLLHSHSTTKVAVKMVNPNSGAAQSLMSELKVMVHLGPHVNVVNLLGACTRGGPVYLITE
FCRHGDLVNYLQRNKHTFLQRDRHNKSESDGGYMDMNKEENAQYVAMKELNYAVIEPAVY
EMPYKPPDHQEASLLLSDSPLLTLNDLLSFSFQVSQAMDFLSSRNCVHRDLAARNVLVCE
GKLVKICDFGLARDLTKDQDYIARGNSFLPVKWMAPESIFQNIYSSQSDVWSYGVLLWEI
FSLGDSPYPDLPMTHEFYSALKKGYRMSQPDRAPDNIFDLMKLCWEKKPQSRPSFSSLVV
SMGNMLSEDYKKRYLQVTENFLKGENPAFVRCRLSPSTAAGDQADEEPDRNDSPAPQVNV
PLLEAESKEEGPSRGTYIIPIHDITIETSSGAALDAVSPLLSESLDTPGAQEVTSSEDRQ
EAEEPPQISCRPEEEGNFL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcaaaggacgaacaggaagtctgaacatgctgcacttcctgctgggtgtg
ttactggttcctcctgaaggggtcatcagtctggaactgcagccttcatcctctgaagtt
ctgatcaactcaaactccaacttcactgtggtgtgttcgggctggagtcaggtgacatgg
cagttacctctggactctcaggtggacggggtcattgtggagaatcaggggtccagcagc
atcctgcagctctataatgccacctggaggaattctgggagatacacctgtgaagaatca
tcgtcctctcagagcagagagattgacatcttcatacctggtcaaggtcctgaggaatgg
ttcatcccgttgggtcgaggtgtggtgatgaaggatgctgaagaagatactatcccctgt
gtggtgtccgacccacggctcaacgtctcgctatacgaacgtcccggcaggacgccggtt
actaggatgacgtacgaaccaggccgaggcttcaccgggcgtctgaacgacacttcgtat
gtgtgcttggcctcccgcggagacgaggagagagagtctcaggtgtactatgtcttcagc
atcgtagtccctaaggtgatggaggtggacctggaggtgtccagcagtgtgttgaagcag
ggggaggttctcactgtaaactgcactgtcaaagacactgatgtggtctacttctcctgg
gacttcccccgcagacaggaaatcgaacctgtgacagacttcctgccccaccgcatccgc
tccttcgtcaacatctcagcggcaacggtggaagattctggtgtgtatgtgtgcacagtg
aaggagaaggtgcaggaacaaactgtggtgaaaaacatcacagtgacagtactggatcaa
ggttacgtctacctgtggcctttaggtgagcccaacgtgtcatctctcctccatcacacg
gtggacttcagagtggagattgacgcccaccctgcccccactgtcctctggaccaaagac
aaccagacggccgccacggaaaccaccttcgtcaacaccacacacctgacaggaagcagg
tatatgagcacgctgacactggtacgagtccagatgaatcagacaggaagatacacagca
accgtttccaatgacgatgatgaagaggagattgtcttcaacctggaggtcacagcaccc
cccaggatcacatctctgtcggaggttggcggaaaggcggtgctgtgtatcagcgaggga
gctccacccccatctgtcaactggtacacctgtcacagctcacacaggtgcagcaatttg
atgggcggctggagaaacctatcagcagccgtggagggcggggctctgcgggagaacgtc
actgaggtggagaagagaggtgtcacccaggtacgcagtgtgttgactctggagagtctc
acctctctgtcagctgttcgctgtgaagccaaaaactctgcagggcaacgagccagagac
ctccgaatactgtccaactctctcctgtctcaggttgccgtcctggcagtggttctggtt
ctggttgtcctcgccgtcgtgttcctcattatcctcatcctcctctggagaaaaaaacct
cgttatgaagttcgttggaaggtgatcgagtctgttagtgctgacggacagcagtacacc
tacgtcgaccctgcccacctgccctacagctccacctgggaagtaccacgagacagcgta
gtactaggtcaggtgttgggttcaggtgcattcggtcgtgtcgtagaggcaaccgtctcc
ggtctgcttcactctcattctacaactaaagtggctgtcaagatggtcaaccccaacagc
ggtgcagctcagtctctgatgtcagagttgaaggttatggttcatctcggtcctcatgtg
aatgtcgtcaacctgctgggagcgtgcacgagaggaggtcctgtctacctgatcactgag
ttctgtcgtcatggagacctggtgaactacctgcagaggaacaaacacaccttcttacag
agagacagacacaacaagagtgagagtgacggagggtacatggatatgaataaggaggaa
aacgctcagtacgtcgccatgaaggagctcaactacgccgtcattgaacctgcagtgtac
gagatgccatacaaaccaccagaccatcaggaggcgtctctcctcctcagcgactctcct
ctcctcactctcaatgacctcctcagcttctccttccaggtctctcaggccatggacttc
ctctcctccagaaactgtgtccacagagacctggcagcgaggaacgtcctggtctgtgag
gggaagcttgtgaagatctgcgactttgggctggccagagatctgacgaaggaccaggac
tacatcgccagaggaaatagctttctgccggtgaagtggatggctccagagagtatcttc
cagaacatttacagctctcagagtgatgtgtggtcctacggagtcttactgtgggagatc
ttctctctgggtgacagcccttaccccgacctccctatgacgcacgagttttactctgct
ctgaagaaaggatacaggatgagccaacctgaccgcgctcctgacaacatttttgatctg
atgaaactgtgctgggagaagaaacctcagtccagaccttctttctcctcattggtcgtc
tccatgggcaacatgttgagtgaagactacaaaaagcgttacctgcaggttactgagaac
ttcctgaaaggtgaaaatccggcatttgttcgatgcagactgagtccgtccacagctgct
ggagatcaggctgacgaagagccggacagaaacgacagccccgccccccaggtgaacgtt
cccctgctggaggcggagtcaaaggaggaaggcccctcccgcggcacttacatcattccc
atccatgacatcaccatagaaaccagcagcggcgctgcgctggacgcagtcagcccttta
ctgtcagagtctttggacacaccaggagcacaggaagtgacatcatccgaggacagacag
gaagctgaggagcctcctcagatatcctgcagacctgaggaagaggggaacttcctgtga
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