Micropterus salmoides (largemouth bass): 119896105
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Entry
119896105 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119896105
Peptidases and inhibitors [BR:
msam01002
]
Metallo peptidases
Family M10
119896105
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
119896105
NCBI-ProteinID:
XP_038565517
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MKTFKLCIVLSLAVAVYCVPVPQVTVQDENFAESYLKKFFNLTEETGPTIRRGISPVSRK
LSDMQQFFGLQVTGTLDADTLEMMKKPRCGVPDVQIASFSTFGENLKWTTNSLTYRIENY
TPDMSVSEVDDSIEKALQVWAKVTPLRFTRIYSGTADIMISFGRLQHGDGYPFDGPDGTL
AHAFAPAPGIGGDAHFDEDETFTFRSNNGYVLFMVAAHEFGHSLGLSHSHDPGALMYPVY
SYANPDTFVLPRDDVNGIQSLYGPNPDKDPVKPGPEPPTTPDACDSTMVLDAVATLRGEI
LFFKGSFFWRSYPQSATPEQSLITNFWPDAPINIDAAYESHESDSVLLFKDRKVWAFSGY
DLVPGYPKSISSFGLPSSVKKIDAALYDVESAKTLFLVDRNYYSYDEAKKAMDPGFPRSL
DQAFSGLTSKVTAAFQYRGFTYIYSGTNMFEYSLSSGTLYRVXGNNYFLRCTSRRV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcaaactctgcattgtactaagcctggcagtcgcagtttactgcgtgcca
gtaccgcaggttactgtgcaagatgagaattttgcagagagctacctgaagaaattcttc
aacctaacagaggagacaggtccaacaatcagacgggggatcagcccggtgagcaggaag
ctgagtgacatgcagcagttctttggtctccaggtcactgggacgctggatgctgatacc
ttagagatgatgaagaaaccccgctgtggcgttccagacgtccaaattgccagtttctcc
acttttggagaaaacctcaagtggactacgaacagcctcacctacaggatagagaactac
acacctgacatgtcagtgtcagaggtcgatgactccatagagaaggcactgcaggtttgg
gccaaagtcactcctctgagattcacaagaatctacagtggcaccgctgacatcatgatc
tcctttggccgcctacagcatggtgatggttacccttttgatggtcctgatggcactctt
gcccatgccttcgctccagcacctggcattggaggagatgctcattttgatgaagatgag
acgttcactttccgctcaaacaatggctacgtcctcttcatggtggctgcccatgagttt
ggccactccctgggcttgtctcactctcatgatcctggtgctctcatgtaccctgtgtac
tcatacgcaaaccccgacacctttgttctgccccgggatgatgtcaacggcattcagtct
ctctatggtccaaacccagacaaggaccctgttaagcctggacctgaacctccaaccacc
cctgatgcctgtgattcaaccatggtcttggacgctgtcgccaccctgcgaggagaaatt
ctcttcttcaagggcagtttcttctggcgtagctacccccagagtgcgacaccagagcaa
agtctcatcacaaacttctggccagacgcccccatcaacatcgacgctgcttatgaaagc
catgagtcagacagtgtcttgctctttaaagatcgtaaagtgtgggctttcagtggctac
gatcttgtacctggctatcctaagtcaatttccagctttggtctgccctcaagtgtgaag
aaaattgatgcagccctttatgatgtggaatctgccaagactctgttccttgtagacaga
aattactacagttatgatgaggccaaaaaggctatggacccgggattccccaggagtttg
gatcaggccttctccggcctgaccagcaaggtgactgcagcttttcagtacagaggtttc
acgtacatctacagtggaaccaacatgtttgagtacagcctgagcagcggcacattgtac
cgtgtgntggggaacaactacttcttgagatgcacttctagaagagtttaa
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