KEGG   Micropterus salmoides (largemouth bass): 119897091
Entry
119897091         CDS       T07309                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04145  Phagosome
msam04514  Cell adhesion molecules
msam04672  Intestinal immune network for IgA production
msam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119897091
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119897091
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119897091
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119897091
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119897091
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119897091
  Exosomal proteins of epithelial cells
   119897091
  Exosomal proteins of breast milk
   119897091
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 ig C2-set_2 Ig_2 I-set
Other DBs
NCBI-GeneID: 119897091
NCBI-ProteinID: XP_038566578
LinkDB
Position
Unknown
AA seq 268 aa
MFVRNKPVTASETCSVWCLEDLKRNMAMNLFLVLLVICLPKYSQGKHLLRFLTFCQRDEP
VDGQYDIEFDGDQLLYVDPVTYQAVPRLPEFAEQWTPDPGLAQDTYVSLGTCHYNIPRAI
KGENYPPAVIVSPTSLIYPKQELELGVPNTLVCLVNDFHPPVVDITWTRNGQLVDQSEVS
QTQYYSNSDFSFRISSYLDFTPQESDIYSCSVHHISLQEPLTKFWEAEVHPDQQVVETTV
CVCGVILGLIGVVTGLWFIMKANKSCQA
NT seq 807 nt   +upstreamnt  +downstreamnt
atgtttgtgaggaacaagccagtgacagccagtgaaacctgctcagtttggtgtttggag
gacctgaaacgcaacatggcgatgaatctgttcctagtgctgctcgttatttgtcttcca
aaatacagtcaaggtaaacacttgcttcgtttcttgaccttctgtcaaagggatgaaccg
gtagatggacagtatgatattgaatttgacggcgatcagctcctgtatgttgaccctgtc
acctatcaggcagtcccacgtttgccagagtttgcagagcagtggacccctgatcctggg
ctggcccaagacacatatgtgtccctgggtacctgccactacaacatcccacgtgccata
aagggagaaaattatcctccagcggtcatagtcagtcccacctccctgatctacccaaag
caggagttggaactcggggtcccaaacaccctcgtctgccttgtcaatgatttccatccg
cctgtagtcgacatcacatggaccagaaacgggcagctggtggaccagagcgaagttagc
cagactcagtactactctaacagcgacttcagcttccgcatctcgtcctacctggacttt
actccgcaagagagcgacatctactcctgtagtgtgcaccacatcagcctgcaggagcct
ctcaccaagttctgggaggctgaagtacacccagaccagcaggttgtagagacaacagtg
tgtgtttgtggtgtgatcctagggctgattggagttgtcacaggactctggttcatcatg
aaagccaacaagtcctgccaggcgtga

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