Micropterus salmoides (largemouth bass): 119897144
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Entry
119897144 CDS
T07309
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04060
Cytokine-cytokine receptor interaction
msam04150
mTOR signaling pathway
msam04210
Apoptosis
msam04217
Necroptosis
msam04350
TGF-beta signaling pathway
msam04620
Toll-like receptor signaling pathway
msam04621
NOD-like receptor signaling pathway
msam04622
RIG-I-like receptor signaling pathway
msam04625
C-type lectin receptor signaling pathway
msam04920
Adipocytokine signaling pathway
msam05132
Salmonella infection
msam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119897144
04350 TGF-beta signaling pathway
119897144
04150 mTOR signaling pathway
119897144
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119897144
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119897144
04217 Necroptosis
119897144
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119897144
04621 NOD-like receptor signaling pathway
119897144
04622 RIG-I-like receptor signaling pathway
119897144
04625 C-type lectin receptor signaling pathway
119897144
09152 Endocrine system
04920 Adipocytokine signaling pathway
119897144
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119897144
09171 Infectious disease: bacterial
05132 Salmonella infection
119897144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
msam04052
]
119897144
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119897144
Cytokines and neuropeptides [BR:
msam04052
]
Cytokines
Tumor necrosis fators
119897144
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Cytokines
119897144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
119897144
NCBI-ProteinID:
XP_038566659
LinkDB
All DBs
Position
Unknown
AA seq
251 aa
AA seq
DB search
MAAYTTTLGDVEMGLEDRTVVLVEKKSCTGQIWKASGALLIVALCLGGVLLFAWCWNGRP
EIMMQSGQTEAQIKEDTSKKTDPHYTLSRISSKAKAAIHLEGTYNDESSENELEWRNDQG
QAFAQGGFQLVKNQIVIPQTGLYFVYSQASFRVSCSNGDEERAGKRLTPLSHRVSRYSDS
IGGNASLMSAVRSVCQNTAKEDNTSGHGWYNAIYLGAVFQLNKGDKLWTETNQSPELETE
EGETFFGAFAL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtacacaaccacactgggtgacgtggagatgggtcttgaggacaggacggtg
gttttggtagaaaagaagtcatgtacagggcagatatggaaggcgtcaggggcccttctc
attgtggccctttgtttgggaggggtcctgctgtttgcttggtgctggaatggaaggcca
gaaattatgatgcaatcaggccaaacagaagcacaaataaaggaggacacatcgaagaaa
acagatccccactacacgctgagccgaatcagcagcaaagccaaggcagccatccattta
gaaggtacctacaacgatgagagttcggaaaacgagctggagtggagaaacgatcaaggc
caggcgtttgctcagggaggtttccaactagtgaagaaccagattgttatcccacaaact
ggcctctacttcgtctacagccaggcatcgttcagagtctcctgcagcaatggcgacgag
gaaagagcgggaaaacgcctcactcctctcagccacagggtctcgcgttactcagactcc
ataggaggcaacgcctctctgatgagcgcggtgaggtcggtgtgccaaaacacagctaag
gaggacaacacatccggacacggctggtacaacgcaatttatctgggtgcagtgtttcag
ctaaataaaggagacaaactgtggacggaaaccaaccagtcaccagagctggagaccgaa
gagggcgagactttcttcggtgcgtttgcactatga
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