KEGG   Micropterus salmoides (largemouth bass): 119897144
Entry
119897144         CDS       T07309                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04010  MAPK signaling pathway
msam04060  Cytokine-cytokine receptor interaction
msam04150  mTOR signaling pathway
msam04210  Apoptosis
msam04217  Necroptosis
msam04350  TGF-beta signaling pathway
msam04620  Toll-like receptor signaling pathway
msam04621  NOD-like receptor signaling pathway
msam04622  RIG-I-like receptor signaling pathway
msam04625  C-type lectin receptor signaling pathway
msam04920  Adipocytokine signaling pathway
msam05132  Salmonella infection
msam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119897144
   04350 TGF-beta signaling pathway
    119897144
   04150 mTOR signaling pathway
    119897144
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    119897144
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    119897144
   04217 Necroptosis
    119897144
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    119897144
   04621 NOD-like receptor signaling pathway
    119897144
   04622 RIG-I-like receptor signaling pathway
    119897144
   04625 C-type lectin receptor signaling pathway
    119897144
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    119897144
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119897144
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119897144
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:msam04052]
    119897144
   00536 Glycosaminoglycan binding proteins [BR:msam00536]
    119897144
Cytokines and neuropeptides [BR:msam04052]
 Cytokines
  Tumor necrosis fators
   119897144
Glycosaminoglycan binding proteins [BR:msam00536]
 Heparan sulfate / Heparin
  Cytokines
   119897144
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 119897144
NCBI-ProteinID: XP_038566659
LinkDB
Position
Unknown
AA seq 251 aa
MAAYTTTLGDVEMGLEDRTVVLVEKKSCTGQIWKASGALLIVALCLGGVLLFAWCWNGRP
EIMMQSGQTEAQIKEDTSKKTDPHYTLSRISSKAKAAIHLEGTYNDESSENELEWRNDQG
QAFAQGGFQLVKNQIVIPQTGLYFVYSQASFRVSCSNGDEERAGKRLTPLSHRVSRYSDS
IGGNASLMSAVRSVCQNTAKEDNTSGHGWYNAIYLGAVFQLNKGDKLWTETNQSPELETE
EGETFFGAFAL
NT seq 756 nt   +upstreamnt  +downstreamnt
atggctgcgtacacaaccacactgggtgacgtggagatgggtcttgaggacaggacggtg
gttttggtagaaaagaagtcatgtacagggcagatatggaaggcgtcaggggcccttctc
attgtggccctttgtttgggaggggtcctgctgtttgcttggtgctggaatggaaggcca
gaaattatgatgcaatcaggccaaacagaagcacaaataaaggaggacacatcgaagaaa
acagatccccactacacgctgagccgaatcagcagcaaagccaaggcagccatccattta
gaaggtacctacaacgatgagagttcggaaaacgagctggagtggagaaacgatcaaggc
caggcgtttgctcagggaggtttccaactagtgaagaaccagattgttatcccacaaact
ggcctctacttcgtctacagccaggcatcgttcagagtctcctgcagcaatggcgacgag
gaaagagcgggaaaacgcctcactcctctcagccacagggtctcgcgttactcagactcc
ataggaggcaacgcctctctgatgagcgcggtgaggtcggtgtgccaaaacacagctaag
gaggacaacacatccggacacggctggtacaacgcaatttatctgggtgcagtgtttcag
ctaaataaaggagacaaactgtggacggaaaccaaccagtcaccagagctggagaccgaa
gagggcgagactttcttcggtgcgtttgcactatga

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