Micropterus salmoides (largemouth bass): 119897343
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Entry
119897343 CDS
T07309
Symbol
arhgef1b
Name
(RefSeq) rho guanine nucleotide exchange factor 1b isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04270
Vascular smooth muscle contraction
msam04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119897343 (arhgef1b)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119897343 (arhgef1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119897343 (arhgef1b)
Membrane trafficking [BR:
msam04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119897343 (arhgef1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDV_N
Motif
Other DBs
NCBI-GeneID:
119897343
NCBI-ProteinID:
XP_038566901
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MSIIGAEDEDFENDLTDVVDDQCAHFNNIDQLREHPTHLLVFIQHVILQFDPAPLLCYLH
ADLFKNLSAKETKKQFVEFYNTFLDKGAILRVATPQLISYELDRTRPDLLSDDTQRRYAH
EIQVLQAAEVAKQLEDFKQKRMMGMTPNEAELIDVESHYPTDRIPMEMKEKSVAENLLDK
MSETQLSIVSDEDKCQSIFSAVAFYMKHLGVKTRAVDSKKSRGGFFRRQLVKSKKDEPTK
AKPRGFPGIHSWIAGNTEVKPKTEAEVEKEKVNPERKGLASGRGSLTEPAAPSLPSKKSG
PSGAPASVPGLEICDGSGNNISIPNIPETSHTDNLSSNRLEPPTLSDGGDVSPVGLGGGV
TVGEPLSPSDTTTEENLEKERRKTSRKVARSESARVDRHSSRRRGSARAKQSRSRSDVDL
QPPSTLTTAPAPLIPQLLHPSDGPVLFPEGPGHSPTSPSPQLEEIEPRLLEFEQDPPNWR
ELASSESLSSLSKKETKRQEVINELFATEHAHVRMLSVLQMVFSKPLEREELLTSTELSA
IFPNLDEIIEMHYNFYENLKKLRLEDKFIVKSISTTVLNRFGGTEGEWFQKLTARFCSHQ
SWALDQIKSRQRREPRFNSFILEAESKPQCRRLQLKDIIPIEMQRLTKYPLLLENIAKST
EDPTERERIQQSAECCRKILNHVNEEVKVMENLLNLKDYQRRLDTSGLKPSIELYTEYKN
IDLTQKKMLYEGPLTWKVTKEKAIEVQCVLLGDLLVLLQRQDDKMVLKCQSKSNIAVQEG
KQMLSPIIKLDSVFLREVATDRKAFYVIFTWDSGAQIYELVAQSVGERKIWTDVIKSAVD
DLKKSGAPLKLPLPLVGGAPFSPTALSAPLSPTENGGLKSSSDRDKDSLMDDKSSDPRHR
LIDFLSDKGFDLIGHSNSYQEKVANSALDEVISLKRLLVGSISLSEDSQPDEENGEEPSE
RPSQEIESCQSTEESQTTDRGAWEENEKEGAGAKGEEKRSISAPLVLSQERMEEVCRRLH
SLEEQLKILQTVEEEHHRLQEALSKFSLGGGNFQ
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcattggggctgaggatgaggatttcgagaatgatctgactgacgtggtggat
gaccagtgcgcgcatttcaacaatatagaccagctgagggagcatcctacccacctgctg
gtcttcatacaacatgtcattctacagtttgaccctgcacccctgctttgttacctccac
gctgacctcttcaaaaacctcagtgccaaagagaccaagaagcaatttgtggagttctac
aacactttcttggacaagggtgcaattctcagagtggcaacaccacagcttatatcctat
gaattggaccgaacccgtccagatctgctctctgatgacacccaaaggcgttatgctcac
gagattcaggtcctgcaggccgctgaagtggcgaaacagctcgaagattttaagcagaag
aggatgatgggtatgacacccaacgaggctgagcttattgacgtggagagccactatccc
accgaccgcatcccgatggagatgaaggagaagtctgtagctgagaacctgctggacaag
atgtctgagacacaactttcaattgtttctgacgaggacaaatgccaatccatcttttca
gcagtggccttctacatgaagcaccttggtgttaaaaccagggcagttgacagtaagaag
tccagaggaggcttcttcaggagacaactagtaaagagtaagaaggatgaacccacaaag
gccaaacccagaggatttccggggatccacagctggattgcaggcaacactgaggtcaaa
cctaaaacggaggctgaagtggaaaaggagaaagtaaatcctgagcgtaagggtctagct
tccggaagaggctccttgactgagcctgcggccccttccctccccagcaagaagtctggt
cccagtggagcccctgcctccgtacctgggttagagatctgtgacggctcaggcaacaac
atcagcatccccaacatcccagagacttcacacactgataacctctcaagcaatcgttta
gagcctccaaccctgtcagacgggggtgatgtgtcccctgtcgggctgggaggaggagtg
accgtcggggagcccctctcacccagcgacactaccacagaggaaaatctagagaaagag
agacggaagacaagtaggaaagtggcgcgtagcgagagtgcccgtgtggaccggcactcc
tctcggcgccgtggctctgcccgggccaaacagtctcgctcccgtagtgatgtggacctg
cagccgccgtctactctgacaacagcacctgccccgctcatcccccagcttctccatcct
tccgatggaccggttttatttcctgaagggcctggccactcccccaccagcccctcccca
cagctggaggagatagagccacgcctcctggagtttgagcaggacccgcccaactggaga
gagttggcctcctctgaaagcctgtccagtctcagcaagaaagagaccaagaggcaggag
gtcatcaatgagttgtttgcaactgagcatgcccatgtgcggatgctaagtgtccttcag
atggtcttctccaagcctttggagagagaggagctcctgacctccactgagctgtccgcc
atcttccccaacctggatgagataatcgaaatgcactataacttctacgagaacctgaag
aaactgcgtttggaagataaattcatagtcaaatccatcagtaccacagtgctcaacaga
tttggaggtacagagggggagtggtttcagaaattgacagcccggttctgcagtcaccag
tcgtgggccttggaccagatcaagagcagacagaggagagagccacgcttcaactccttc
atactggaggcagagagtaagccccagtgccgcaggctgcagcttaaagacataattccc
atagagatgcagagactgaccaaatatccattactgctggagaatattgccaagagcaca
gaggacccgacagagagggagaggatccagcagagcgcagagtgctgcagaaagatcctc
aaccatgtcaatgaggaggtcaaagtgatggagaacctattgaatctgaaggactaccag
cgtagattggacacatcagggctcaaacccagtattgagctttatactgaatataagaac
atcgacctgactcagaagaagatgctatatgaaggtcctctgacctggaaagtcacaaag
gaaaaggcaattgaggtgcagtgtgtattgcttggagacctgctggtgctcctccagagg
caggatgataagatggtcctcaaatgccagagcaagagtaacattgccgtgcaggagggc
aagcagatgctgagccctattatcaagctggactcggtcttcctacgggaagtggccaca
gatcgaaaggccttctatgtgatatttacctgggacagcggtgctcagatctatgaactg
gtggctcagtctgttggagagaggaaaatctggactgatgtgataaaatcagctgtggat
gatctgaagaagagtggagcaccccttaagttgccgctgcctcttgttggaggagctccc
ttcagtcctactgcgctgtctgcccctttgagcccgactgagaatggaggtttgaaaagc
agcagtgatcgcgataaggacagcttgatggatgacaagtcttcagaccccaggcacagg
ctgattgatttcctgtcagacaaaggcttcgacttgataggccattccaacagctatcag
gagaaggtggccaacagtgctttggatgaagtcatttcgctgaaaagactgttggtcggc
agcatcagtctatcggaagactcgcagcctgatgaagaaaatggagaagagccatcagag
aggcccagtcaggaaatagagagctgtcagtcgacagaagaaagccagaccacagacagg
ggagcgtgggaggagaacgaaaaagaaggtgcaggggcgaagggagaggagaagaggagc
atcagcgcgcccctggtgctgtcccaggagaggatggaggaagtgtgcaggaggcttcac
agtctggaggaacaactaaagatactacagactgtagaagaggagcaccacaggctgcag
gaggccctttccaagttctcgcttggggggggtaacttccagtga
DBGET
integrated database retrieval system
