KEGG   Micropterus salmoides (largemouth bass): 119897645
Entry
119897645         CDS       T07309                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04145  Phagosome
msam04514  Cell adhesion molecules
msam04672  Intestinal immune network for IgA production
msam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119897645
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119897645
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119897645
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119897645
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119897645
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119897645
  Exosomal proteins of epithelial cells
   119897645
  Exosomal proteins of breast milk
   119897645
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 I-set ig Tsr1_G-like
Other DBs
NCBI-GeneID: 119897645
NCBI-ProteinID: XP_038567428
LinkDB
Position
Unknown
AA seq 241 aa
MKCSALIILMLNSFCAFSEIPHEIIYFVGCFVNGTAEVQFEFDGEEILYVDFPKEEIIYT
VPRFINPDPSQILVGLSILRDALENKDFCSFFTVIGAEIAKIPPEEKNPPESILYPAEEA
QLGVENSLTCFVNHFYPPDIKVSWTKNGRPVSEGVSLSRYHPNDDQTFHQFSTLAFTPRE
GDIYSCTVEHSALEWPKTRIWELDLNQPSLGPDIFCGVGLTLGLMGIAVGVFLIAKGHHG
Q
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaagtgctctgctctcataatcctgatgctcaacagcttctgtgccttctcagaaatt
cctcatgaaatcatctattttgtgggctgctttgtgaatggcacagctgaggtacagttt
gagtttgatggtgaggagattttatatgtggatttcccgaaagaggagattatctacact
gtgcccagatttattaatcctgatccaagtcaaattttggtgggtttgagtatacttaga
gatgctctggaaaataaggacttctgttcattttttactgtaatcggtgcagagatagcg
aaaattccaccagaagaaaaaaaccccccagagagcatcctctaccctgcagaagaagct
cagctgggagttgaaaacagcctcacctgctttgtgaatcatttctacccgcctgacatc
aaagtcagctggactaaaaatggtcgtccagtgtcagaaggggtgtcactcagtcgctat
catcccaatgacgatcaaaccttccaccagttctctactctggcttttacaccaagggag
ggggacatttatagctgcactgtggagcactcagccctggaatggcctaaaaccaggatc
tgggagcttgacttgaatcaacccagtcttggaccagatattttctgtggagtgggcttg
actctgggcttgatgggaattgcagttggagtatttttaattgcaaaaggacaccatgga
caataa

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