Micropterus salmoides (largemouth bass): 119898467
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Entry
119898467 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 11A-like
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119898467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
msam04050
]
119898467
04090 CD molecules [BR:
msam04090
]
119898467
Cytokine receptors [BR:
msam04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119898467
CD molecules [BR:
msam04090
]
Proteins
119898467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
119898467
NCBI-ProteinID:
XP_038568567
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MRLNFSTSWIVRGWMTCVLVTFYAQNAISKSLQCDEKEYLSKSSRCCNKCRPGFRVFTEC
TGSVQTKCVKCSSGEYQPGWTEKTRCLQQKFCDEVKGFMKMPENLEAEESCRCLSGLQCH
PINCEWCEQIPPCRAGEGLEVDPESPYGRMICVACKKGYFSDENTHNQCKPWTNCKAEGR
SETQPGSAKADAVCGQPFSGAAPSWVIVSVLSVITVLCLLILLLFCYKDKLKLLSVNLRS
CVQNLKRTRIQQETLAPLYHSGAGGGIGGGPGGSKCTPCELTKLXPTPPQPTDEPLCTFP
TSVSDVKVSLPFTGEMKEEEGTKGKTVMEDQSEGSGEPEEVSEEEEVVSVLPLLAGSCVC
VIPIHEPLEVGENEDCSQAVSPGTPATCSCGGLDGDESGKEEKSESVRADNGEKGDGNQE
KVLSKSETSVAALDSLSPPFFHTSSVITPSGPIPELCLPLSQAHVRPEFKPDLTDRSLVK
QKDLYRLASTDSTLTEKNPXVTSVSPLMTSSSVGDLYLDKPPESSSPEQGLGLSWRDSRG
NKLSSVESELECSPESLHSQLAEPTLTSGQVSGNNNTTFISSGQVMNFSGDVIVVYVSQT
SLGSEETGQDHAFGSPVQEEANETDPFFQSSLRSQXDSVSYSTLQDETLPVQEAMEERPL
GK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaacttttctacaagttggatagtccgaggctggatgacgtgtgtcctcgtg
accttttacgcacagaatgcgatctccaaatctctccagtgtgatgaaaaggagtactta
agtaaaagctccaggtgctgcaataagtgtcggccaggcttccgtgtgtttactgagtgc
actggttccgtccagactaaatgtgtcaaatgtagtagtggtgaataccagcccggatgg
actgaaaaaacgcgctgtttacagcagaagttctgtgacgaagttaagggttttatgaag
atgcctgaaaaccttgaggcagaagagtcgtgccgctgcctatccggcctccaatgccat
cccatcaactgtgagtggtgtgagcagatacccccctgcagagctggagaaggactcgag
gtagaccctgagtctccttatggaaggatgatctgtgttgcgtgtaagaaaggctacttc
tctgatgaaaatactcacaatcaatgcaaaccatggactaattgtaaggctgagggccgg
agtgaaacgcaaccaggcagtgcaaaggctgacgcagtatgtggacaacctttctctggt
gcagcgccctcctgggtcatagtttcagtgctgtcagttatcactgttctgtgtctcctc
attctgctcctcttctgctacaaggacaaactgaaattactctctgtaaatctgcgatcc
tgtgtccagaatctgaagaggactaggatacaacaggagaccttggcccctctgtaccac
agtggagcaggaggaggaataggaggaggccctggaggctccaaatgtacaccatgtgag
ctgaccaaactcntacccacccccccgcagcccactgatgagcctctatgcaccttcccc
acctctgtctccgatgtcaaggtctcactgcccttcacaggggaaatgaaagaggaagaa
gggaccaaaggcaagacagtgatggaggatcagagtgaagggtctggagaacctgaggag
gtgtcagaagaagaggaggttgtgagtgtgcttcctcttttggcaggttcttgcgtgtgt
gtcattcccatccatgagccattggaagtaggtgagaatgaggactgtagccaggctgtc
agccccgggactccagcaacctgctcatgcggagggcttgatggagatgagagtgggaaa
gaggagaaaagtgagagtgtaagggcagacaatggagaaaagggtgacggaaaccaagaa
aaggttttgtccaagagtgagacaagtgttgcggctcttgactctctttcgcctcctttc
ttccacacctcctctgtaatcactccctccggtccaattcctgaactctgcctgccgttg
tctcaggctcatgtgaggccggagtttaaacctgacctgactgacaggtcactggtaaaa
caaaaggatttatacagattggcaagcacagactccaccttaacagagaaaaaccccnac
gtgacctcggtcagccccttgatgacatcctcatctgttggagatctctacctggacaag
ccccctgagtcctcgagcccggagcaaggcctgggactttcctggagggatagtagggga
aacaagctctcttctgtggagtcggaactggagtgctcacctgagagcctccatagtcag
ctggctgagccaactcttacctcaggtcaggtgtctgggaacaacaacaccaccttcatc
tccagcggtcaggtgatgaacttcagcggtgatgtcatcgtcgtctacgtcagccagacg
tctctcggcagcgaggagacggggcaggaccatgcctttgggagccctgtccaggaggag
gccaatgagacggacccgttcttccagagcagcctgaggtcacaangggactctgtctcc
tacagcaccctgcaagacgaaacactgccagtccaggaagcgatggaggagcggccactt
ggaaaatga
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