Micropterus salmoides (largemouth bass): 119899188
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Entry
119899188 CDS
T07309
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03272
Virion - Hepatitis viruses
msam04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119899188 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119899188 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119899188 (ldlrb)
Membrane trafficking [BR:
msam04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119899188 (ldlrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
Vgb_lyase
EGF_3
Muc_B2
Motif
Other DBs
NCBI-GeneID:
119899188
NCBI-ProteinID:
XP_038569587
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MFGMWGGLTGLCACWCLLMLIHFPPQADAAFTCSSTQFKCGNGRCITSKWTCDGTDDCGD
GTDELPATCATKTCLETEYNCGAPMNQCIPGGWHCDGKADCKNGADEKNCTAKQCKDGQF
QCANGQCISTTFVCDKDNDCSDGSDEVFCPKPTCNSRYFQCNNSVCVLAFWRCDGEEDCA
DGSDEWPQNCEGQDPVKTAVPCGVHEFQCGNGQCIHSRWWCDGGFDCQDGSDEVNCSRPM
CRPDEFQCNDGTCIYGSRQCDGKHDCRDESDENGCHRVDVCEGPTNFKCRSGECISMEKV
CDKQKDCSDSSDEPKECDNNECLTRNGGCSHYCNDLKVGYNCSCRAGYRLNVDKKTCADI
DECTEPDTCSQICINLPGSYKCDCEKGYEIDPASKTCKAESGTVPTLYFTNKHEVRKITV
DRSEYVRLITGLKNAVALDMDMPNKMIFWSDLFLKQIYSSKIDVAGNSSHHTVVIGSGIE
APEGIAVDWIHGNIYWTDSVLRTISVATTDGSKRKTLITENLEKPRAITIDPVNNFMYWT
DWGEEAKIEKSGLNGGDRIALVTDNIMWPNGITLDMVNQRLYWVDSKMHTLSSIDVNGGT
RHSLIFSEETLSHPVSLTVFEEKVFWTDMSNSAVFSANRLTGKNITKLAMDLDQPEDIVL
YHSLKQPIGTNWCRESNSINGGCEFLCLPAPLITKHSPKFTCACPDNMTMGPDMRKCVTA
ASIAPPAETGATLPPKAPPKSSMPRQPVPTTTTAAPTTTLSSLPTQSTVEPAATVQGNRL
AALPEESPSSHPVTLYIVLPILVMSLLLFGAVLLWRHWRLKNTNTIHFDNPVYQKTTEDE
LHICRNNSDGYVYPQRQMLSMDDIDVA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatgtgggggggactcaccggactgtgcgcatgttggtgtctgctgatgctg
attcattttcctcctcaagcagatgcagccttcacatgcagctccactcagtttaagtgt
ggaaatgggaggtgcatcaccagcaagtggacttgtgatggaactgacgattgtggtgat
gggactgatgaactgcctgcaacttgcgcaaccaaaacctgtctggagaccgagtacaac
tgtggtgcccccatgaaccagtgtataccaggaggatggcactgtgacggcaaagctgac
tgtaaaaatggggctgacgagaaaaactgcacggccaaacaatgcaaggatggccagttt
caatgtgccaatggccagtgtatatccaccaccttcgtgtgtgacaaggacaatgactgc
tcagacggctcggacgaggttttttgccccaaacccacctgcaactctcgttacttccag
tgcaacaactcggtgtgtgtgctggccttttggcgctgcgatggagaagaggactgtgcc
gacgggtctgacgagtggccgcagaactgtgaggggcaggatcctgtgaagacagcggtg
ccctgtggagtccacgagttccagtgtggaaacgggcagtgtatccacagcaggtggtgg
tgtgacggaggcttcgactgtcaagatggatcggacgaggtcaactgcagtcgtcctatg
tgtcgtcccgatgagttccagtgtaatgacggcacctgtatctatggcagccgccagtgt
gacggaaagcatgactgcagggacgagagtgatgagaatggctgccacagagttgatgta
tgtgaaggccccaccaacttcaagtgtcgcagcggggagtgtatcagtatggagaaagtg
tgcgacaaacaaaaagactgcagcgattcatcggatgaacctaaagaatgtgacaacaac
gagtgtttgacgagaaacggtggctgctcccattactgcaatgatctgaaggtcggctat
aactgctcctgccgtgctggatacaggctcaacgtggacaagaaaacctgtgcagacatc
gatgaatgtactgaaccagacacttgcagtcagatctgcatcaacttgcctggcagctac
aagtgtgactgtgagaagggctacgagatcgacccggcgagcaagacatgcaaggctgaa
tcaggcacggtgcccactctgtacttcaccaacaaacatgaggtgagaaagattacagtg
gaccgcagcgaatacgtccgtctgatcactgggctgaagaacgcggtagctctggacatg
gacatgcctaacaagatgatcttctggtccgacctgtttctgaaacaaatctacagctcc
aagatagatgtagccggtaactcctctcaccacactgtagtaattggcagtgggattgag
gccccagagggaattgcggtggattggattcatggcaacatctactggactgacagtgtt
ttgaggaccatctctgtggcaacgacagacggcagcaagaggaaaaccctgatcacagaa
aacctggagaagccaagagccattacaattgaccccgtaaataacttcatgtactggaca
gattggggtgaggaggccaaaatagagaagagtgggctgaatggaggtgatcgcattgcc
ctggtgacagataacatcatgtggccaaatggcatcaccctagacatggtcaatcagcgt
ctgtactgggtggactccaagatgcacactctgtccagcatcgatgtgaacggagggaca
cgacacagtctcattttcagcgaggaaacgctctcccaccccgtctctctgactgtgttt
gaggagaaagtgttttggacagacatgagcaacagtgctgtttttagtgcaaaccgcctg
acaggaaagaacatcaccaagctggcaatggacctggaccagccagaggacatcgtactg
taccacagcctcaagcagccaatcggtacaaactggtgcagagagagtaacagtataaat
ggaggttgtgagtttctgtgcctccctgcacctctgatcaccaagcactctcctaaattc
acctgcgcttgtcctgacaacatgaccatgggacctgacatgaggaaatgtgtgacagca
gcctcaattgcaccccctgctgaaactggtgcaacgctcccgcccaaagctcccccaaag
tcttctatgcccaggcagcctgtccctaccactacaacagctgcacctacaactacgttg
tctagcctgcccacacagagcacagtggagcctgccgccactgttcaaggtaacagactg
gcagccctgcccgaagaatccccttcatcccatcctgtcactctctacatcgttttgccc
atattggtcatgtccctgctgctctttggagcagtgctgctatggagacactggcgcctg
aagaacaccaacaccatccactttgacaatcctgtgtaccagaaaaccacggaggatgag
ctccacatctgcaggaacaactctgatggctacgtttatcctcagaggcaaatgctaagc
atggacgacatagacgttgcatga
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