Micropterus salmoides (largemouth bass): 119905441
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Entry
119905441 CDS
T07309
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119905441
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
119905441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT_EZ
Atx10homo_assoc
Nipped-B_C
HEAT
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
119905441
NCBI-ProteinID:
XP_038578411
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MRVCLGPSLHSAPACELFCPTSTGRGSEGGVHRRSSESVSNSLLKIPPLRSLALRRAALL
LRVCSFWHFVETGFIHPVHGHRKMMAPEPLRSVLTIGSVEDTSLALPSDSKLRSGQQRVL
DQVHTIKRSKSKPGKNGTQSPSPTSLSPQTLTTYTEFGAFKFSPSKTNGTFSHTSSAMSA
GYNKMMNTQKSRTLSAKAMRGRYVSTSGIWEQQNNASTWPNRPNGLKPSRSDPALAPPFS
PAPVPMVMRAKGQAAQSQHSLQTRVNRQSTYSITNGTQMTSSQTRIVQPPSALSQTDGKM
GTMKTSKLEQQSAVNSTINMSDLTLDEALEFLSHPEEKFQLCGASFIHHLTFKEERTKQE
IFQLGGIPILVSLLRSPNPGVSQSAAGALRNLVFKDEANKLEVQHCGGIAKALQLLKETD
STETQKQITGLLWNLSSNDKLKEELIATALPALTENVVLPFTSWSDNSINNNIHPDVFYS
ATGCLRNLSCAQKKERQAMRECRGLIDSLMNYIQSCVAEENPDDKSVENCACILHNLTYQ
LEAESPECFSKFQPQTGDQPGSKKSPTIGCFSPKSSKAQKQFSFDVARGLPEDAPSGVKW
LCHPKAMQTYLALLGLSQKDATLEACCGTLQNLTASKGAGSSAMSQILVKKLGALLYMPA
LIKSPNRSLQKTAMCLLGNMSRTSSLQTTMAKQILPELTSLLSSSPTEMGRSDESISTAC
STVRTLMLADTEVSKKVINNQLVSSVADLSENGAFPKSRKAASLLLYSLWNEKNLQGVVK
KLGMAKSLFVNDNTTAMHKSVQVIE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtctgcctcggcccttcccttcactccgcacctgcgtgtgaactcttctgtccc
acctcgacggggcgcggttccgagggtggagttcaccgtcgcagctctgagagcgtttca
aatagcctgctaaagatacctccgctgcgttccttggcgctgagacgagccgcacttctc
ctccgggtctgcagtttttggcactttgtggaaactggtttcatccatcccgttcacgga
caccgaaagatgatggctccggagccgctgcgatccgtgttgacaatcgggagcgtggag
gacacgtcgctcgcgctgccctccgacagcaagctgcgctcgggacagcagcgcgtgctg
gatcaggtgcacaccatcaagaggagcaagtccaaaccggggaagaacggcacgcagtcg
ccctcaccaacaagcctgtctcctcagactttaacaacatataccgagtttggagcgttc
aagttctctccatccaaaaccaatggcaccttcagccacaccagctccgctatgtcagca
ggctacaacaaaatgatgaatactcagaagagccgcactctatctgctaaagccatgagg
ggaagatatgtgagcacctcaggcatatgggaacagcaaaacaacgcttccacctggccc
aatagacccaatgggctgaaacccagtcgcagtgaccctgccttggctcctcctttttct
cctgctcctgtacctatggttatgagagccaaagggcaggctgcccagagccagcactcc
ctccagactcgagtaaataggcaaagcacctattccataaccaatggcactcagatgacc
agcagccagacacgcatcgtccagccgccctctgccctgtctcaaactgatggcaagatg
ggtaccatgaaaacatccaagttagagcagcaatcagcggtgaacagtacgataaacatg
tcagacctgaccctagacgaggctttagaattcctgtctcaccctgaagagaagtttcag
ctgtgtggagccagcttcatccaccacctcaccttcaaagaggagcgcaccaagcaggag
attttccaactagggggtatccccattctggtatccctgctgcggagccccaaccctggg
gtgagtcagtctgctgctggggctctgagaaacctagtgttcaaagatgaggccaacaag
ctggaggttcagcactgtggcggtatagcaaaggccctgcagctactgaaggagacagat
tctactgagacccagaaacaaatcactggcctgctatggaacctgtcctccaacgataag
ctgaaggaagaacttatagctacagcactgcccgccctgactgagaatgtggtgttgcca
tttacctcctggtcagacaacagcatcaacaacaacatacaccctgatgtcttctacagt
gccacaggttgcctgcggaaccttagctgcgcccaaaagaaggagaggcaggcaatgaga
gagtgccggggcctcatcgactccctcatgaattacatccagtcctgcgtggcagaggaa
aaccccgatgacaagtctgtggagaactgtgcatgcatcctccataacttgacttaccaa
ctggaggctgagtcccctgagtgcttcagcaagttccaacctcagactggggaccaacct
gggagtaagaaaagccccacaattggatgcttcagccctaagagcagcaaggctcaaaag
cagttttcgtttgatgtggctcggggattgccagaggatgccccgtcaggtgtgaagtgg
ttgtgccaccccaaagccatgcagacctacctggccctgctgggcttgtcgcagaaagat
gccaccctggaagcctgctgtggtaccctgcagaacctcactgccagcaagggagcgggg
tccagtgccatgagccagattttggttaaaaagttgggggctctgctgtacatgcccgct
cttataaagtctcctaaccgcagcctgcagaagactgccatgtgcctgctgggtaacatg
tcccgtaccagcagtttgcagaccaccatggcaaagcagattctgcctgagctcaccagc
ctcctgtcttctagccccacggagatgggaaggtctgacgaaagtatttcaacagcctgc
agcacagtacggactctgatgttggcggacaccgaggtcagcaaaaaggtcattaataat
caactggtgtcatcagtggctgacctcagcgagaacggggctttccccaaaagcagaaaa
gcagcttccctactgctctacagtttatggaacgagaagaatttgcaaggtgttgtgaaa
aagctggggatggccaaatcgctttttgtgaatgacaacaccacagcaatgcacaagtcg
gtgcaagttattgagtaa
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