KEGG   Micropterus salmoides (largemouth bass): 119906688
Entry
119906688         CDS       T07309                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04010  MAPK signaling pathway
msam04060  Cytokine-cytokine receptor interaction
msam04150  mTOR signaling pathway
msam04210  Apoptosis
msam04217  Necroptosis
msam04350  TGF-beta signaling pathway
msam04620  Toll-like receptor signaling pathway
msam04621  NOD-like receptor signaling pathway
msam04622  RIG-I-like receptor signaling pathway
msam04625  C-type lectin receptor signaling pathway
msam04920  Adipocytokine signaling pathway
msam05132  Salmonella infection
msam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119906688 (tnfa)
   04350 TGF-beta signaling pathway
    119906688 (tnfa)
   04150 mTOR signaling pathway
    119906688 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    119906688 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    119906688 (tnfa)
   04217 Necroptosis
    119906688 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    119906688 (tnfa)
   04621 NOD-like receptor signaling pathway
    119906688 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    119906688 (tnfa)
   04625 C-type lectin receptor signaling pathway
    119906688 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    119906688 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119906688 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119906688 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:msam04052]
    119906688 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:msam00536]
    119906688 (tnfa)
Cytokines and neuropeptides [BR:msam04052]
 Cytokines
  Tumor necrosis fators
   119906688 (tnfa)
Glycosaminoglycan binding proteins [BR:msam00536]
 Heparan sulfate / Heparin
  Cytokines
   119906688 (tnfa)
SSDB
Motif
Pfam: TNF RanGAP1_C
Other DBs
NCBI-GeneID: 119906688
NCBI-ProteinID: XP_038579922
LinkDB
Position
Unknown
AA seq 241 aa
MEGECKVVLDAAVDIEARKQTTASVKPSSKLTTALLAFTLCLAAAAAVLVFNSHTKGSGQ
DEDNNDHRHTLRQISNGRAAIHLQGEYNPEMKTSVQWQNQVDQSHFQGGLQLTDNEIVIP
QDGLYFIYSQASFRVKCSSSDDDDTTTSSMVHLSHTVQRWSTSYGDDDNKSYQTILHSVR
TACQKATSSSSNQGESWFTAMYMGAVFNLKRGDKLKTVMEEKMLLNLEDAQGETFFGAFS
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaaggtgaatgcaaggtagtgctggacgccgctgtcgacatagaagcaaggaagcag
acaacggcaagtgtcaaacccagttccaagctaaccacggccctgctggcgttcacactc
tgcctcgctgctgctgctgctgtcctcgtcttcaacagtcataccaagggctcaggacaa
gatgaagacaataatgatcatcgtcacacattgaggcaaatttcaaacggaagagcggcc
attcatttacaaggagaatacaaccctgaaatgaagacctcagtgcaatggcagaaccag
gtggaccagtcccactttcagggaggactgcaactcactgacaatgaaatagtgattcct
caagacggcctctacttcatttacagccaagcgtccttcagggtcaagtgcagcagcagt
gatgatgatgacaccaccacttcatccatggtccatctgagccatactgttcagcgctgg
tccacctcgtatggtgacgacgacaacaagtcgtaccagaccatcctgcactctgtccgc
accgcctgccaaaaggcaaccagcagcagttcaaatcaaggggagagctggttcacggcc
atgtacatgggagctgtgttcaacctgaaaagaggggacaaactgaagacagtgatggag
gagaagatgctgctcaacctggaggatgctcagggagaaactttctttggtgcattttcc
ttatga

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