Micropterus salmoides (largemouth bass): 119910151 Help Entry 119910151         CDS       T07309                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism msam  Micropterus salmoides (largemouth bass) Pathway msam04115   p53 signaling pathway msam04145   Phagosome msam04148   Efferocytosis msam04350   TGF-beta signaling pathway msam04510   Focal adhesion msam04512   ECM-receptor interaction msam04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:msam00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     119910151   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     119910151  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     119910151    04148 Efferocytosis     119910151   09143 Cell growth and death    04115 p53 signaling pathway     119910151   09144 Cellular community - eukaryotes    04510 Focal adhesion     119910151   09142 Cell motility    04820 Cytoskeleton in muscle cells     119910151  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:msam04131]     119910151   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:msam00536]     119910151 Membrane trafficking [BR:msam04131]  Endocytosis   Phagocytosis    Opsonins     119910151 Glycosaminoglycan binding proteins [BR:msam00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    119910151 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_CFP_C TSP1_ADAMTS EGF_CA cEGF EGF Laminin_G_3 TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  119910151 NCBI-ProteinID:  XP_038584501 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MMLCGIIMLLMLWSCEGARLAESREDNSVYDLFDLARVNKRHHGVSLVKGEDPYSPAYKV LNPDLIPPVPDSSLRDLLDSIQAERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPVFEIIS NGKANTLDVVYSTMDQQQVVSIEEADLATGHWKNITLFVQDDRVQLYVGCEEISASEMDF PIHKVLSQEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSGASLTDV MTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDIASMFKELKGLGVVVKKLSNELRK VSEDNTLLKNQMNIHSGICFHNGIVYKDKDEWTVDGCTECTCQNSATVCRKISCPLIPCT NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGEG RQTEICQKSPCPINGGWGPWSPWDTCTVTCGGGIQNRKRLCSDPVPKYGGKDCVGDATMS QVCNKQDCPINGCLSNPCFAGTKCTSFPDGSFRCGKCPLGYTGNGITCKDIDECAEVPDA CHTHNGVHRCENTEPGYNCLPCPSRFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH KNANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNC PSLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV FEANTDQTDTDNNGEGDACAIDIDGDGILNEDDNCPYVYNADQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYISNSNQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatcattatgctgttgatgctttggagctgtgaaggcgcaagactg gcagagagtcgggaagataacagtgtgtatgacttatttgatctggcccgggtaaacaag agacaccacggagtgagtttggtcaaaggtgaagacccctacagccctgcatacaaggtc ctgaacccagacctgatcccccctgtccccgacagctccctcagggacctcctcgactcc attcaggctgagaggggcttcctcctcctggtcaacctgaagcagtttaagaaaaccagg ggcagccttttgaccatcgagaagaatgacggatcagggcctgttttcgagattatttcc aacgggaaggcgaatactctggatgtggtctattccaccatggaccagcagcaggtcgtg tccatcgaggaagcagacttggccactggacactggaagaacatcacactgttcgtccag gatgacagagtgcagctttacgtcggctgtgaggaaatcagtgcatcagagatggatttc ccaatccataaagtgctgtcccaggaggtggcagatattgccaggctcaggattggaaag ggagctgtaaaggacagattcatgggagtgcttcaaaatgtacgctttgtctttgggacc actcttgatgccatactaagaaataagggttgccagagtggagctagcttaacagatgtc atgaccttggacaacccagtcaatggctccagccctgccattaggactgattacaccggc cacaaagccaaagatctgcagtctgtctgcggcttctcttgtgaagacatcgccagcatg tttaaggagctcaagggactcggtgtggttgttaaaaagctgtcgaatgagctccgcaaa gtgtctgaggacaacacgctgctgaagaatcaaatgaacatccatagtggaatttgcttc cataacggcattgtgtacaaggacaaagatgagtggactgtggatggctgcaccgagtgc acctgccagaactctgctactgtgtgtcgcaaaatctcctgccctctgatcccatgcaca aacgccacagtgcccgacggagagtgctgccctcgctgtggaacaccgagcgactatgca gaagatggttggtccccctggtctgaatggacccactgttcggtgacttgcggtcggggc atccagcagcgcggacgctcctgtgaccgcatcaatagcaactgtgaaggcacctctgtc cagacccgtgattgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttgg agccactggtctccctggtcttcgtgctctgtgacctgtggtgagggggtcatcacgcgg atacgcctctgcaactcccccacaccccagatgggtggcagggactgccagggagaagga cgtcaaactgaaatttgccaaaagtcaccatgtcctatcaatggaggttggggaccttgg tcaccgtgggacacctgcacagttacctgtggtgggggaatccagaaccgcaagcgtctc tgctctgaccctgtccccaaatatggaggaaaggactgcgttggtgatgctactatgtct caagtgtgcaacaaacaggactgcccaattaatggttgtctctccaacccatgcttcgcc ggcacaaagtgcaccagcttccctgatggctctttcaggtgtggcaagtgtccacttggc tacactgggaacggcatcacttgcaaagacattgatgagtgtgcagaggtcccagatgct tgccatacacataatggagtccaccgttgtgagaacactgagcccggttacaactgtctt ccctgcccctcacgtttctctggtcctcagccctttggaagaggagtggaacaggcaact gctaaaaaacaggtttgcaaaccccgtaacccttgccaagatggtagccacgactgccat aaaaatgcaaactgcatctacttgggcgttttctctgagtccatgttccgctgcgagtgc aagccagggtatgccgggaatggccgtatttgcggagaggacagtgacctggacggatgg cccaacactgacctgctgtgtgtggagaacgccacctaccactgcaagaaggataactgc cccagccttcctaactctggccaggaagatcatgataaagatggcctgggtgatgaatgt gaccatgatgatgacaatgatggtatccccgatgatagggacaactgcccaagagtttac aaccctgcccagtatgacgcagacagagatgacgttggcgaccgatgtgacaactgtgtg tttgaggctaacactgaccaaactgacactgacaacaatggagagggtgatgcctgcgct attgacattgatggtgatggcattctgaacgaggacgacaattgtccatatgtttacaac gctgaccagagagacactgacagggacggggtgggagaccattgtgacaactgccctctg gagcacaaccctgatcagatcgactctgactcagatctcataggagacaagtgcgacaac aaccaggacattgacgaggacggtcaccagaacaatttggacaactgcccctatatatcc aactccaaccaggcagaccacgacaaggatggcaagggtgacgcctgcgaccatgatgat gacaatgacggcattcctgatgacaaagacaactgtaggctggcttttaaccctgaccag gtggactctgatggtgatggccgtggtgatgtgtgcaaagacgactttgaccaagacaat gtcttggacatctatgacgtgtgtccggagaactttgccatcagtgaaacagacttccgc agatttcaaatggttcctctggaccccaagggtacctcccagattgaccccaactgggtg gtccggcatcagggcaaggaattggtgcagactgtcaactgtgatcctggcattgctgtt ggttacgatgagttcagcgcagtggacttcagtggaacattcttcatcaacacggacaga gatgacgactatgctggatttgtgtttggctaccagtccagttcacgcttctacacagtg atgtggaaacagattacacagacctactggtcccacacacccacaagagctcaaggctac tctggcctgtcaatcaaagtggtcaactccaccaccgggcctggtgagcatctgaggaac gccctgtggcacaccggagacaccgcaggacaggtgcgcactctgtggcacgaccccaag aacattggctggaaggacttcactgcctacagatggcatctgacccacagacccaagact ggacttattagagtggtcatgtatgaaggaaagagaatcatggcagattctggaaacatc tatgacaagacgtatgctggtgggcgactagggttgtacgtcttctctcaagagatggtt tacttctctgacctcaaatacgaatgcagagatacataa

DBGET integrated database retrieval system