Micropterus salmoides (largemouth bass): 119910151 Help Entry 119910151         CDS       T07309                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism msam  Micropterus salmoides (largemouth bass) Pathway msam04115   p53 signaling pathway msam04145   Phagocytosis msam04148   Efferocytosis msam04350   TGF-beta signaling pathway msam04510   Focal adhesion msam04512   ECM-receptor interaction msam04518   Integrin signaling msam04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:msam00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     119910151   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     119910151    04518 Integrin signaling     119910151  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     119910151    04148 Efferocytosis     119910151   09143 Cell growth and death    04115 p53 signaling pathway     119910151   09144 Cellular community - eukaryotes    04510 Focal adhesion     119910151   09142 Cell motility    04820 Cytoskeleton in muscle cells     119910151  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:msam04131]     119910151   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:msam00536]     119910151 Membrane trafficking [BR:msam04131]  Endocytosis   Phagocytosis    Opsonins     119910151 Glycosaminoglycan binding proteins [BR:msam00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    119910151 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 TSP1_CFP_C TSP1_ADAMTS EGF_CA cEGF Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  119910151 NCBI-ProteinID:  XP_038584501 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MMLCGIIMLLMLWSCEGARLAESREDNSVYDLFDLARVNKRHHGVSLVKGEDPYSPAYKV LNPDLIPPVPDSSLRDLLDSIQAERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPVFEIIS NGKANTLDVVYSTMDQQQVVSIEEADLATGHWKNITLFVQDDRVQLYVGCEEISASEMDF PIHKVLSQEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSGASLTDV MTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDIASMFKELKGLGVVVKKLSNELRK VSEDNTLLKNQMNIHSGICFHNGIVYKDKDEWTVDGCTECTCQNSATVCRKISCPLIPCT NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGEG RQTEICQKSPCPINGGWGPWSPWDTCTVTCGGGIQNRKRLCSDPVPKYGGKDCVGDATMS QVCNKQDCPINGCLSNPCFAGTKCTSFPDGSFRCGKCPLGYTGNGITCKDIDECAEVPDA CHTHNGVHRCENTEPGYNCLPCPSRFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCH KNANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNC PSLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDVGDRCDNCV FEANTDQTDTDNNGEGDACAIDIDGDGILNEDDNCPYVYNADQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYISNSNQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatcattatgctgttgatgctttggagctgtgaaggcgcaagactg gcagagagtcgggaagataacagtgtgtatgacttatttgatctggcccgggtaaacaag agacaccacggagtgagtttggtcaaaggtgaagacccctacagccctgcatacaaggtc ctgaacccagacctgatcccccctgtccccgacagctccctcagggacctcctcgactcc attcaggctgagaggggcttcctcctcctggtcaacctgaagcagtttaagaaaaccagg ggcagccttttgaccatcgagaagaatgacggatcagggcctgttttcgagattatttcc aacgggaaggcgaatactctggatgtggtctattccaccatggaccagcagcaggtcgtg tccatcgaggaagcagacttggccactggacactggaagaacatcacactgttcgtccag gatgacagagtgcagctttacgtcggctgtgaggaaatcagtgcatcagagatggatttc ccaatccataaagtgctgtcccaggaggtggcagatattgccaggctcaggattggaaag ggagctgtaaaggacagattcatgggagtgcttcaaaatgtacgctttgtctttgggacc actcttgatgccatactaagaaataagggttgccagagtggagctagcttaacagatgtc atgaccttggacaacccagtcaatggctccagccctgccattaggactgattacaccggc cacaaagccaaagatctgcagtctgtctgcggcttctcttgtgaagacatcgccagcatg tttaaggagctcaagggactcggtgtggttgttaaaaagctgtcgaatgagctccgcaaa gtgtctgaggacaacacgctgctgaagaatcaaatgaacatccatagtggaatttgcttc cataacggcattgtgtacaaggacaaagatgagtggactgtggatggctgcaccgagtgc acctgccagaactctgctactgtgtgtcgcaaaatctcctgccctctgatcccatgcaca aacgccacagtgcccgacggagagtgctgccctcgctgtggaacaccgagcgactatgca gaagatggttggtccccctggtctgaatggacccactgttcggtgacttgcggtcggggc atccagcagcgcggacgctcctgtgaccgcatcaatagcaactgtgaaggcacctctgtc cagacccgtgattgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttgg agccactggtctccctggtcttcgtgctctgtgacctgtggtgagggggtcatcacgcgg atacgcctctgcaactcccccacaccccagatgggtggcagggactgccagggagaagga cgtcaaactgaaatttgccaaaagtcaccatgtcctatcaatggaggttggggaccttgg tcaccgtgggacacctgcacagttacctgtggtgggggaatccagaaccgcaagcgtctc tgctctgaccctgtccccaaatatggaggaaaggactgcgttggtgatgctactatgtct caagtgtgcaacaaacaggactgcccaattaatggttgtctctccaacccatgcttcgcc ggcacaaagtgcaccagcttccctgatggctctttcaggtgtggcaagtgtccacttggc tacactgggaacggcatcacttgcaaagacattgatgagtgtgcagaggtcccagatgct tgccatacacataatggagtccaccgttgtgagaacactgagcccggttacaactgtctt ccctgcccctcacgtttctctggtcctcagccctttggaagaggagtggaacaggcaact gctaaaaaacaggtttgcaaaccccgtaacccttgccaagatggtagccacgactgccat aaaaatgcaaactgcatctacttgggcgttttctctgagtccatgttccgctgcgagtgc aagccagggtatgccgggaatggccgtatttgcggagaggacagtgacctggacggatgg cccaacactgacctgctgtgtgtggagaacgccacctaccactgcaagaaggataactgc cccagccttcctaactctggccaggaagatcatgataaagatggcctgggtgatgaatgt gaccatgatgatgacaatgatggtatccccgatgatagggacaactgcccaagagtttac aaccctgcccagtatgacgcagacagagatgacgttggcgaccgatgtgacaactgtgtg tttgaggctaacactgaccaaactgacactgacaacaatggagagggtgatgcctgcgct attgacattgatggtgatggcattctgaacgaggacgacaattgtccatatgtttacaac gctgaccagagagacactgacagggacggggtgggagaccattgtgacaactgccctctg gagcacaaccctgatcagatcgactctgactcagatctcataggagacaagtgcgacaac aaccaggacattgacgaggacggtcaccagaacaatttggacaactgcccctatatatcc aactccaaccaggcagaccacgacaaggatggcaagggtgacgcctgcgaccatgatgat gacaatgacggcattcctgatgacaaagacaactgtaggctggcttttaaccctgaccag gtggactctgatggtgatggccgtggtgatgtgtgcaaagacgactttgaccaagacaat gtcttggacatctatgacgtgtgtccggagaactttgccatcagtgaaacagacttccgc agatttcaaatggttcctctggaccccaagggtacctcccagattgaccccaactgggtg gtccggcatcagggcaaggaattggtgcagactgtcaactgtgatcctggcattgctgtt ggttacgatgagttcagcgcagtggacttcagtggaacattcttcatcaacacggacaga gatgacgactatgctggatttgtgtttggctaccagtccagttcacgcttctacacagtg atgtggaaacagattacacagacctactggtcccacacacccacaagagctcaaggctac tctggcctgtcaatcaaagtggtcaactccaccaccgggcctggtgagcatctgaggaac gccctgtggcacaccggagacaccgcaggacaggtgcgcactctgtggcacgaccccaag aacattggctggaaggacttcactgcctacagatggcatctgacccacagacccaagact ggacttattagagtggtcatgtatgaaggaaagagaatcatggcagattctggaaacatc tatgacaagacgtatgctggtgggcgactagggttgtacgtcttctctcaagagatggtt tacttctctgacctcaaatacgaatgcagagatacataa

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