Micropterus salmoides (largemouth bass): 119911933
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Entry
119911933 CDS
T07309
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119911933 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119911933 (trpc5a)
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119911933 (trpc5a)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119911933 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
119911933
NCBI-ProteinID:
XP_038586835
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEVYYN
MDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLSHRR
PSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFRQE
YEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKYHQK
EVGTQPEDSSSVENEFRQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELD
PRQCHDLAKLKLAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLL
FPFFSLIYLLAPKSALGSFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPP
TIVEWMILPWVLGFIWAEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKY
NSSRPREEWEMWHPTLIAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKF
LFIYCLVLLAFANGLNQLYFYYETKASEELNNCKGIRCERQNNAFSTLFETLQSLFWSIF
GLLNLYVTNVKARHEFTEFIGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWK
FARTKLWMSYFDEGGTLPPPFNIIPSPKSIWYLLMWLHNKLCRRGQPHGEETHKCENLRE
FTERHADSLIQNQHYQEVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVL
DLLGNRRPPRRHYSSSSETARDDGAMASEDDSESGDGGGGSGQRSKGVTFMTPLEDDVKP
TPTHGVSALVRSISGMTQIEGGGEGEEGELEEGIGWGEEEEEEEGKPKSNGLKTTVIPPS
STTVLPSPSFSSSFSSSFARTRTRLQRISTPSAKTDSFKRLSYLFSRSKRKAPPMPLPLQ
SPPSYTISDGLLRPLGGHSHSDFGLSNVTRSETHLNEVGLSVDINNPSFSPRRTNGRDSL
LTLPLPPPCPCQSLHCASNMSESSSRLLDSSEDVFQGGGVGGAGEGGMDGGGGRGGVMMM
GGWVGPCDDVIEDSCEVIEDSVTTQL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgacacagctgtactacaagaaggcgacgtactcgccgtaccgtgaccgcatcccgctt
cagatcgtgcgagctgaggtggagctgtctgctgaggagagggcctacctcaccgctgtg
gagaaaggtgactatgcgggtgtcaaacatgcccttcgcgaggcggaggtctactacaac
atggacgtgaactgcctggacccgctgggccgcagcgcgctcctcatcgccattgagaac
gagaacctggagatcatggagctcctgcttgaccacggcatccacaccggcgacgccctg
ctctacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcgcacaggaga
cccagcggcgagaaacaggtaccgtcgctgatgatggacagtcagttttcagagttcacc
ccagacataactcccatcatgctcgctgctcacaccaacaactatgagatcatcaagctc
ctcgtccagcggaaggtcaccattcccagaccacaccagatacgatgtgactgtgttgag
tgtgtatccagttcagaagtagacagtcttcggcattcacggtctcgactcaacatctac
aaggctctggcctcgccctccctcattgcgctatccagtgaagatcccatcctcactgcc
ttcagactgggctgggaactcaaagagctcagcaaggtggagaatgagtttcgtcaggag
tacgaggagctatcgcagcagtgcaaacggttcgccaaagaccttctggaccaggccagg
agttcaagagagctggaaaccatcctgaaccacagagacaacgaccagagcgaggaactg
gaccccagacagtgccatgacctggccaagctcaaactggccatcaaataccaccaaaaa
gaggtagggactcaacctgaagattctagcagtgtggagaatgagtttcgtcaggagtac
gaggagctatcgcagcagtgcaaacggttcgccaaagaccttctggaccaggccaggagt
tcaagagagctggaaaccatcctgaaccacagagacaacgaccagagcgaggaactggac
cccagacagtgccatgacctggccaagctcaaactggccatcaaataccaccaaaaagag
tttgtggcccagccgaactgccagcagctgctagccacgctgtggtacgacggcttcccg
ggctggaggagacgacactgggcggtcaaactggtcacctgcttcatcatcggactcctg
tttcctttcttctcactgatctacctgttggcccctaagagcgctctgggaagcttcatc
aagaagcctttcatcaagtttatctgtcacacggcgtcctacctgaccttcctgttcctc
ctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcagggacccccacca
accatcgttgagtggatgattctcccatgggtgctgggcttcatctgggccgagattaag
gagatgtgggacgggggattcacagagtacatccacgactggtggaacctgatggacttc
gccatgaactcactatacctggccaccatatcgctgaagatagtggcctacgttaagtat
aactcctctcgtcccagggaggagtgggagatgtggcaccccacgctgatagctgaggct
ctgttcgccatcgcaaacatcttcagctccctcagactcatctccctcttcaccgccaac
tcccacctcgggcccttgcagatctcactggggaggatgctgctggacatcctcaagttt
ctcttcatttactgtctagtcctgctggcttttgctaatggcctaaaccagctgtatttc
tactatgagaccaaggcctcagaggaactcaacaactgcaagggcatccgatgtgagagg
cagaacaacgccttctcaacgttatttgagactcttcagtctctgttctggtcgatattc
gggctgctgaacctgtacgtcaccaacgtgaaagcccggcacgagttcacagagttcatt
ggggcgaccatgtttgggacatacaatgtcatctcgctggtggttctgctcaacatgctc
atcgccatgatgaacaactcctaccaactcatcgctgaccacgccgacatcgagtggaag
tttgcccgcaccaagctgtggatgagttactttgacgagggcggcacgctgccgcctccg
ttcaacatcatccccagccccaagtccatctggtacctgctcatgtggctccacaacaag
ctgtgtaggagaggccagccgcatggggaggaaacgcacaaatgtgaaaacctcagagag
ttcacggaacgccacgctgacagtctgatacagaatcagcattaccaggaagtgatccgg
agcctggtgaagaggtacgtggcggccatgatacgcagtgccaagacggacgagggactg
acggaggagaactttaaggagttgaagcaagacatctccagtttccgctacgaggtcctc
gatcttcttgggaaccggcgtcctccccggcgacattactcctcctccagcgagacagca
agagacgatggcgccatggcctcagaggacgacagcgaatcgggtgacggcggtggaggg
agtggccagaggtcaaagggcgtgaccttcatgaccccgctggaagacgacgtgaagccg
acacccacgcacggcgtgtctgccttggtgcgctccatttctggaatgactcagatagaa
ggagggggagaaggtgaggagggggagctggaggagggcattggatggggggaagaggag
gaagaagaggaggggaaaccaaagagcaacgggctgaagacaaccgtcatccctccatcc
tccaccaccgtcctcccctccccgtcattctcctcgtcgttctcctcatcgttcgctcgt
acgaggacccgcctgcagcgcatctcaactccgagcgcaaagacagactctttcaagcgc
ctctcctacctgttctcacgctccaagcgcaaagcaccacccatgcctctccccctccag
tccccaccttcctacaccatttcagacgggttgctccgccccctggggggccacagccac
tccgactttggtctcagtaacgtaaccagaagcgagactcacctgaacgaggtgggcctc
tcagtcgacatcaataacccctcgttttccccgcggagaacgaacgggcgggactcgctc
ttgacgctgcccctcccgcccccgtgcccctgccaatccctgcactgtgcttccaacatg
tccgagtccagctcgcgcctcctggactccagcgaggacgttttccagggcggaggcgtg
ggaggagcgggcgagggcggcatggatggaggcgggggaagaggaggggttatgatgatg
ggcgggtgggtgggaccgtgcgacgatgtcatagaggacagctgtgaggtcatagaggac
tctgtcaccacacagctatag
DBGET
integrated database retrieval system
