KEGG   Micropterus salmoides (largemouth bass): 119912429
Entry
119912429         CDS       T07309                                 
Name
(RefSeq) mamu class II histocompatibility antigen, DR alpha chain-like
  KO
K06752  MHC class II antigen
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04145  Phagosome
msam04514  Cell adhesion molecules
msam04672  Intestinal immune network for IgA production
msam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119912429
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119912429
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119912429
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119912429
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119912429
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119912429
  Exosomal proteins of epithelial cells
   119912429
  Exosomal proteins of breast milk
   119912429
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_3 Ig_2 I-set ig SSFA2_C
Other DBs
NCBI-GeneID: 119912429
NCBI-ProteinID: XP_038587555
LinkDB
Position
Unknown
AA seq 239 aa
MMMKMMKVLVLGLSWVLWVSADGLHEDINIFGCSDSDGEFMFALDGEELWYADFINKRGV
YTQPPFVDHVSYVEEVYESAVADLQVCRDSLKLRRKAIKDPLENDPPSSLLVYTRDDEEL
GEKNQLICHVTGFYPAPVKIYWTKNGENVTEGTSINVPFYNTDGSFRQTSRLEFIPQQGD
IYSCTVQHLALDSPLTRIWDVETTPPSVGPAVFCGLGLTVGLLGVAAGTFFLIKGNECS
NT seq 720 nt   +upstreamnt  +downstreamnt
atgatgatgaagatgatgaaggtcctggtcctcggtctctcctgggtcctctgggtctca
gctgacggtctacatgaggacattaatatctttggctgttcagactctgacggagagttc
atgtttgctctggatggagaagagctttggtacgcagacttcatcaacaagagaggagtc
tatactcagcccccctttgtagatcatgtgagctatgtggaagaagtttatgaatctgct
gtggctgatctacaggtctgcagagacagcctcaaactaagacgtaaagccatcaaggat
cctctggagaacgatcctccttccagcctgctcgtctacaccagagacgacgaggagctc
ggagagaagaaccagctgatctgtcatgtgactggtttctatcctgctcctgtaaagatc
tactggaccaagaacggagagaacgtgactgaaggaaccagcatcaacgttcccttctac
aacacagacggttccttcagacagacgtccagactggagttcatcccacagcagggagac
atttatagctgcacagtccaacatctggccctggacagtcctctgacccggatctgggat
gtggagacgaccccccccagtgttggacctgcagtgttttgtggactgggtctgactgtg
ggtctgctcggtgtggctgctggaaccttcttcctcatcaaaggaaacgagtgcagctga

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