Micropterus salmoides (largemouth bass): 119914202
Help
Entry
119914202 CDS
T07309
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119914202 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119914202 (kdm2aa)
04121 Ubiquitin system [BR:
msam04121
]
119914202 (kdm2aa)
03036 Chromosome and associated proteins [BR:
msam03036
]
119914202 (kdm2aa)
Enzymes [BR:
msam01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
119914202 (kdm2aa)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119914202 (kdm2aa)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119914202 (kdm2aa)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119914202 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
119914202 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
JHD
F-box
PHD
Cupin_8
C1_1
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
119914202
NCBI-ProteinID:
XP_038589247
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MDESKPRYSKRLRAGTRRRYHDDGISDEEIDGRRTFDLDEKVNGQRFGSERVVRMEGREF
TFEFIQRGGLRDPIIFEKPDGLGMKMPDANFTVNDVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPSQREKLYNVISLEFSHTKLENLVRRPATVDLIDWVDNMWPRHLKERQR
DSTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTHQNLE
LYENWVLSGKQGDVFLGDRASDCQRIELKQGCTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVPLKFRYPFYYEMCWYVLERYVFSMTKTSYLTPEFQKHSLGIG
LKKPSSSASEQVEEEEEDASGSDKEAPEQQSDKPAVQVHLTSLELEGLGNLLGKLEALPS
NKKCVPSGIHNAPALIAHIKALLEEHANDDPKLSYTGKPIVKWPKRPSWYQPPPPPPPPR
PKLASTPIIPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRDMKKFGGPGKLKQ
TCVLRQCLSPGLPLSAVCEICKEPNQEETGDPSLTLMECSNCAQIVHPACLTVQGEGVVN
KDLPSCWECPKCVQGITDPESSGSDESLAAGHQQHIRPHGPLVLRLGPGPSATIGGPVGS
QQDGEVVRCGFFPPPPLLPSCSSSSSASLLLVAAPLPSQPISSRLQCKGDRGEGLAVKRK
SSSLLDARMAKIYRRQRHSRDGDDSASDDDDEASQRRKMALHARGGSRSSRRGFGANARG
LPRGGSAHRGNRGGLVTPGSSSVLKLKRGMGMREAARRGRGVRLRGGSRMQRRGDESEES
DDDDDDEEEEEEEEEEEEDSEDGDKERHHRRRRRRRTDDDDDDDDDEDEDSEGQEFDPEE
EEMDTLEEEEEEEEDEGRWDSDPEPPVLLVSDLNDDLLSGSYLTVTLQRPHKTKRHPGSI
VPKLEAAMAPRTTAGGSGGPQGFIHRKTALSKPSRLRSAEATADSAAPRGPGRPRLQGNH
GDRGTRDRSASSSEEEEAAAAPSSLSPPSLLSLPSFKDVGNERGGEKEVWVSVFRYLNRA
ELLACMSVCKAWYKWSCDKRLWSHVDVSRCSPLTNQALAGIIKRQPTSLDLSWTPLAKRQ
LNCLLTRLPGLRELRVAGLSWSCLSALVSPVLPYLRLLDLRWCEGLKDAQIKEIITPP
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatccaagcctcgatacagcaaaaggctgcgggccggtacccgtcgacgttat
cacgatgacggcatctctgatgaggagattgatggaagaaggacgtttgatctggacgag
aaagtcaacggtcagaggttcggctctgaacgggtcgttcggatggagggaagagaattt
acgtttgagttcatccagagaggcggcctcagggacccaatcatctttgagaagcctgat
ggactgggaatgaagatgcccgatgctaacttcactgtcaatgacgtcaagatgtttgtc
ggcagcagacgcatgatagatgtgatggacgtgagcactcagaagggaacagagatgtca
atggcccagtggacacgctactacgagacccctccatctcaaagagagaaactctataat
gtcatcagcctggagtttagccacaccaagctggagaacttggttaggaggcctgccaca
gtagatctaatagactgggtggacaacatgtggcctcgccacctgaaagagagacagaga
gactcaaccaactccatcaatgacatgcagtaccccaaagtacagaagtactgtctgatg
agtgtcgagggctgctacacagactttcacattgactttggagggacgtcagtgtggtac
cacatactgagaggaagcaaggtgttctggctgatccctcccacccatcagaatctggag
ctgtatgagaactgggtactgtctggtaaacagggagatgttttcctgggagaccgagca
tctgactgccagaggattgaactgaagcagggctgcacctttatcataccctcaggttgg
attcatgcggtctacacccctgtggactctatggtgtttggaggaaacttcctgcacagt
ttcaacatccctatgcaacttaacatctgtaatatagaagacagaacgcgggttccactg
aagtttcgttaccccttctactatgagatgtgctggtacgtgttagagcgctatgtcttc
agcatgaccaagacctcctaccttacaccagaatttcagaaacactcgctgggcattggt
ctgaagaagccatccagttcagccagtgaacaggttgaggaggaggaggaggatgctagt
ggcagtgataaagaggctccagagcagcagtctgataagcctgcagttcaagttcatctg
acttctctcgagctggagggattggggaacctgctagggaaactggaggctctgccctcc
aacaagaagtgtgtgccatcagggatacacaacgccccggccctcattgcacatatcaag
gcactactggaggaacatgccaatgacgatcccaaactgtcctacacaggaaaacccatc
gtcaagtggccaaagagaccgtcgtggtaccagcctcctccaccaccaccacctcctcgt
cctaaattggcctccactcccattatcccacgaccacagaaaccagcctcctccatgtct
gtgctgagacggcgcagggtcaggtgtaaacgctgtgaagcctgtatgagaccagagtgt
ggagactgtaacttctgcagagacatgaagaagttcggaggaccagggaagctcaagcag
acctgtgtgctacgacagtgtctctctccgggccttcctttgtctgcagtgtgtgagatc
tgcaaggagcccaatcaagaggaaactggagacccctccctcaccctgatggaatgttcc
aactgtgcacagatagtccatcctgcctgcctcacggttcagggtgaaggagtagtgaat
aaagacctgcccagctgttgggaatgtccaaagtgtgtccaagggatcactgacccagag
tcatcaggcagcgatgaatcgttggctgccggccaccagcagcacatccgtccccacggc
cccctggtcctcaggctgggccccggcccctctgctaccatagggggtcctgtgggctcc
cagcaggatggggaggtggtccgctgtggtttcttccctcctcctcctcttcttccttcc
tgctcttcctcctcctcagcgtcacttctattggtggcggcccctctgccttctcagcca
atcagctcgagactgcagtgtaaaggagaccgaggggaaggccttgcagtgaagcggaaa
tcttcctctctgctcgacgctcgtatggctaagatctaccgacgacagagacacagccgc
gatggagacgactccgccagtgatgacgatgatgaagcctctcagaggagaaagatggca
ctccatgcccgaggagggagccgctcttccaggagggggtttggtgccaacgcgagaggc
ctgccgagaggaggttccgcccacagaggaaacagaggagggcttgtgactcccggctct
tcctccgtcctcaagctaaagcgagggatgggcatgagggaggccgcacggaggggacgg
ggggtgaggctgcgggggggctccagaatgcagcgaagaggcgacgaatccgaggagtcg
gacgacgacgacgacgacgaggaggaagaggaggaggaggaggaggaggaggaggacagt
gaagacggagacaaagaaagacatcatcgacgtagaaggaggcgtaggactgatgatgat
gacgacgacgacgatgatgaagatgaggacagtgagggtcaggagtttgaccctgaagag
gaggaaatggacacgctggaagaggaggaggaggaagaggaagatgaagggcgctgggat
tcagacccagaacccccggtcctcctggtgtctgatctgaatgatgacctgctgagcggc
tcctacctgaccgtcactctacagcgcccccacaagaccaagaggcacccaggttccatc
gttccaaagctggaagcagccatggctccgaggaccactgcagggggttctggtggtccg
cagggcttcatccacagaaagacagctctgtccaaaccttcacgactcaggagcgccgag
gccacggctgacagtgcagccccaagaggacctggcaggccacgtctgcagggtaaccat
ggcgacagaggcactagagatcgctctgcatcttcttcagaggaagaggaagctgctgct
gcaccctcctccctgtcccctccgtctctgttgtctctgccgtcctttaaagacgtgggc
aacgagagaggaggggagaaggaggtgtgggtgtctgtgttcagatacttgaacagagcc
gaacttctggcctgcatgagcgtctgtaaggcctggtacaagtggagctgtgacaagcgt
ctgtggagccacgtggatgtgagtcgctgcagcccgctcacaaaccaggccctggcaggc
atcatcaaacgccagcccacctctctggacctgtcctggacccccctggccaagagacag
ctcaactgtctgctcaccaggctcccaggtctgagggagttgagggtggctggtctatcc
tggtcctgtctgtctgcgctggtctctcccgttctgccctacctgcggctgctggacctg
cgctggtgtgaaggccttaaagacgcccagattaaagagatcatcacccccccctga
DBGET
integrated database retrieval system
