KEGG   Micropterus salmoides (largemouth bass): 119914573
Entry
119914573         CDS       T07309                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    119914573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msam03000]
    119914573
   04121 Ubiquitin system [BR:msam04121]
    119914573
   03036 Chromosome and associated proteins [BR:msam03036]
    119914573
Enzymes [BR:msam01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     119914573
Transcription factors [BR:msam03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    119914573
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     119914573
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119914573
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     119914573
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC DUF7885 Cupin_8 LRR_4 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 119914573
NCBI-ProteinID: XP_038589884
LinkDB
Position
Unknown
AA seq 1395 aa
MAQAVETCAESGRRLRSICRMMYDENEDLSDVEEIANIRGFSVEEKLVSGSYSAQYVQLM
EGKDFSYEYVQREALRIPLIFKEKDGLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KHSQTEATNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIYEIENRTKVHSKFRFPFYCEICWYVLERYLHCLTKRSYFSQESRKE
PAVMDNETKANTESPSSDSRSQDMNEDSCETQVRDDQGEKYEKVAHDGPCSPDNRRGQHL
KAVLSVDSEDSCNPGSTSLDFPQTPSDSPASESQNKWTHLTEFELSGLRTLVEKLESLPE
NKKCVPRGIENPQALLDDMKVVLKEHADDDPKLAITGVPVVYWPKRTIKPRPPNRPKPKM
AASPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKASKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPDLP
MVATATVTALTTTTAVKRKAEREECPKRKEEEPPKKRPPLLSLDGTPRPRLEDNPLRKKR
KLFDTNDEPVIVKKKKKLSKLDDPLTPKLLRQIKAENDHGDEDDDQEDHDEDGFSLDRIH
VKEKKEYDVEEQEDEKGEEEETVTKERDSSAEDKVKVLLSPLLRTSAARESDQSSSNSPR
AGPSSESGDAQERSSVQLKARHQRRRLPNKELSKEFNQEMPKTEDCLSNQIHGSVKTEDS
PANHNRRPLKNEDSVTNQNRKPLKTEDPTTNQSRRALKMEEGLANQNRRPLKTEDSLANQ
NHRPVKPEPENEIDDQKPRWPLNNGSGDLGDWLRHRGREVNETPRGFSPLSWNRTTPITS
ICPRPLPCRSPPKCIQMERHVIRPPPISPPPDRLPLDDGEAHVMRREMWMTVFSHLTHRD
LCVCMRVCRTWNRWCCDKRLWKHINLNRCKSITPLMLSGIIRRQPAALDLSWTNISKKQL
SWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDN
RPGQLDNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPSLSKLDLSYCNHVTDQSVNILTA
AGTTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFVAEMSVS
VQFELIEEKLLQKIS
NT seq 4188 nt   +upstreamnt  +downstreamnt
atggcccaggccgtggaaacgtgtgctgaatctggacgcaggctgcgctccatctgccgg
atgatgtacgacgaaaacgaggatttgtctgatgtggaagaaattgcaaacataagaggt
ttcagtgtggaggaaaagcttgtcagtggcagttacagcgcacagtatgtccagttgatg
gagggtaaagacttttcttatgaatatgtgcaaagggaggctctcaggatcccactcatt
tttaaagagaaagatggactagggatcagaatgcctgatccagaatttacagtcagtgaa
attaaaggcctggttggcagtcgacggtctgtggatgttatggacgtgagcactcagaag
ggctctgaaatgagcatggctcagtttgtccgttattatgagacaccagaggaagagcgg
gataaactcttcaatgtcatcagcttagagttcagccacactaagctggagaacctcatc
aagcggcccacagtggtggatcaagttgactgggtggacaacatgtggcctcctgatctg
aaacacagccaaacagaagccaccaatgtaatctcagagatgaagtaccctaaagtgcaa
aggtattgtttgatgagtgtgaagggctgctacacggacttccacattgatttcggagga
acctctgtttggtatcacgtgttcaagggacagaaagttttttggcttgtgcctccaacc
cctcataaccttgctctttatgaggactgggtcctatcaggcaagcagagtgatatcttc
ctgggagaccgagctgatggatgccagagagtggagcttaagcaaggatacaccttcttc
atcccatctgggtggattcatgctgtctacactcccgaagacacactggtgtttggaggc
aacattctgcacagtttcaacattcctatgcagcttaccatctatgagatagagaacagg
actaaggttcattccaagtttcgtttccccttctactgtgagatatgctggtacgtcctg
gaaaggtacctgcactgcctgaccaaacggtcctacttttctcaggagagccgcaaagag
cctgcagtaatggacaatgagacaaaggcaaacacagagagtccctcctctgactcaagg
agccaggacatgaacgaggactcgtgtgagactcaggtcagggatgatcagggtgaaaaa
tatgagaaagtcgcccatgatggcccctgctctcccgacaaccggcgaggccagcacctc
aaagctgttttatctgttgactctgaggacagctgtaatcccggctccacctccctagat
ttcccccaaactccatctgactctccagcctcagagtctcagaataaatggacacatttg
accgagtttgaactgagtggactcaggacgctggttgagaagctggagtcactccctgaa
aataagaaatgtgttccgcggggaatagagaacccacaagccctgctggatgacatgaag
gttgtcttaaaagaacatgctgatgatgaccccaaattagcgatcactggagtccctgtg
gtgtactggcctaagagaactataaagccgcggcctcccaaccggccgaaacctaagatg
gcagcatctcctgcatcagcagtcaagttgtcagccagtcggggaacatctggtgccagg
aggagacggacgcgctgtcggaagtgtgaggcatgcctgcggaccgagtgcggggagtgc
cacttctgtaaagacatgaagaagtttggcgggccaggccggatgaaacagtcctgcatc
atgaggcagtgcattgcacctgtactgccccacacagcagtgtgtcttgtctgtggagag
gcaggaaaagaggacacagtggaggatgaggaagagaaatttaaccttatgctcatggag
tgctccatctgcaatgagattgttcatcctaactgtcttaaggtaaaagattcaaatgga
gttgtcaatgatgagttgccaaactgctgggagtgcccaaaatgcaaccatgctgggaag
accgggaaagcctcaaagcaaaaaagggggccagggtttaagtacgcgtcaaaccttcct
ggctccctactgaaagaaccacggttaaaccgggattcaaaagaggagcctgacctgcca
atggtggctacagcaactgttactgctttgactaccacaactgcagtgaagagaaaggca
gagcgggaagaatgccctaagaggaaagaggaagaacctccaaagaaacgcccccccttg
ctgtctctggatggtacgccccgaccaaggcttgaagacaacccactaaggaaaaagagg
aaactttttgacactaatgatgaacccgtcattgtgaaaaagaagaagaagctttcaaaa
ctggatgatcccttgactccgaagctgttgcggcaaatcaaggcagagaacgatcacggt
gatgaagacgatgaccaggaggaccatgacgaagatgggttttccttggacaggattcat
gtaaaggagaaaaaagagtatgatgtcgaggagcaagaagacgagaagggagaggaagag
gagactgtgacaaaggagagagacagtagtgcagaggacaaagtcaaggtcctgttaagt
ccgctgctaagaacatccgcagccagagaaagtgaccagtcatcttccaactctccaaga
gcggggccaagcagcgaatcaggagatgctcaggagaggagctccgtccaactgaaggct
cgccaccagcgtcgacgcctccccaacaaagaactgagcaaagagttcaaccaggagatg
cccaagacagaagactgtctgtccaaccagatccatggctcagtaaagacggaggacagc
ccagccaatcacaatcgacgaccactgaaaaatgaggactctgtgaccaatcagaatcgt
aaaccactgaaaacagaggacccaaccactaatcagagccgcagggctcttaaaatggag
gaaggtctggcgaatcaaaaccgacggccactaaaaacggaggacagcctggccaatcaa
aaccacaggcccgttaaaccagagcccgagaatgaaatagacgaccaaaagccacgatgg
cctcttaataacggcagcggcgacctgggcgactggctgcgacacaggggacgggaggtg
aacgagacgccgcgcggtttctcaccgctcagctggaacagaaccacaccgatcacatcg
atatgcccccgcccactcccctgccgctcaccgccaaaatgtatccaaatggagcgccat
gtgatccggccccctcccatcagccctccgcccgacagactgccgctggacgacggcgag
gcacacgtgatgcgaagagagatgtggatgactgtgttcagccacttgactcacagagat
ctttgtgtctgcatgcgcgtctgcaggacctggaacaggtggtgctgtgacaagaggctt
tggaaacacatcaatctgaaccgctgtaagtccatcacacctctcatgctgagtggtatc
attcggagacagccagcagctctggacctcagctggaccaacatctccaagaaacagctc
agctggctcatcaacaggctgccaggcctgcgtgtgctgctgttgtcaggatgctcctgg
gtggcggtctctgctctttgcacctccagctgtcctcttctgcgaactctggatgttcag
tgggttgagggactgaaagatgcccagatgagggacctgctgtcgcctcctacagataac
aggccaggtcagttagacaacaggagtaagctgcgtaatgtggaggatctgcgcctcgca
ggcttggacatcacagacacgtctctgcgcctcatcatacgttacatgccctcgttgtcc
aagctggacctcagctactgcaaccacgtcaccgaccagtccgttaacatcctgaccgct
gcagggacgaccaccagagactcgctcactgacatcaacctgtcagtctgtaacagggtc
acagaccagtccctgacctatttcaagcgctgtggaagcatatgtcacatcgacctgcgg
tactgcaaacaggtgaccaaggaagggtgcgaccagttcgttgcagaaatgtcagtcagc
gtgcagtttgaactgatagaagagaaactgctgcaaaagatcagttag

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