Micropterus salmoides (largemouth bass): 119915746
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Entry
119915746 CDS
T07309
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119915746
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119915746
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
DUF7557
Motif
Other DBs
NCBI-GeneID:
119915746
NCBI-ProteinID:
XP_038591387
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MRDTGEGGGGDKTSKTEKDQSWIPKIIKKRVCTTFVEDSLSNGVQCQCGGARDAHASVAL
GDYFSTAMVNHWDSAQHSSEYPTDAFGELQFVGVSRRHSYFLRLSWDTPPSAVYNLMTGN
WGLPAPNLVVSVVGGEDRTKVKTWVREVLRQGLVKASQSTGAWIVTTGMREGVGGCVGEA
VRDHATAASSVSLNKVVALGIAPWGMVQNRQQLVNPQGSFPAKYSIENTSKDFCCLDNNY
QAFLLVDDGTVGRRGGETRFRAKVEEYISHQRTGIWGSGSIDIPVLCMLVSGEASMLERV
DRSLKTCMPWLVLAGSGGLADFLSDVLENLSLAPASNEVDGEVGPSVDLKDRVAERFKKH
FPSEAESDKLVERALSIYQNRDFITFYHGEQEGPNDFDTVLLKTLVQASKQRTSADASPY
SEELKLAVTWNRVDIAKSELFNGDIQWRYEDLEDSMTDALINNKPQFVRLFTENGLNIME
YLTYGRLENLFRSVADGTVLYQLLQCRLVERLGTSPPVPTFTNLQDSSNVAAGKSSPVAD
ISLFEVAGVLDLLMGDVCQSFYYDALGLEQTSSKRRALRRASKLLRSDCMYRAERCPYPW
ASLFIWAVLQNRSEMAIYFWEMSVESVLSALSGCKILRELSKLEDETETKLSMKELAQRF
ENLAHDVFGSCYRSNESRSFTLLITQSQVWAGTTCLQMGMGADARLFFSHDGVQTLLSQI
WWGDMKRNTEVWKLLLTFFCPFLCYTNLITFRKQEDHQQEEGGGEPNEDGQGRDSDSLYG
TTIFSFSDIKNIEADAQGSTSPRTAAIKGIPHSHTPPKRPFIVSRWRQFWFAPVTSFLGN
VLMYFLFLLLFAYVLMVDFKPPPPSGPSNTEYVLYFWVFTIVCEEIRETFFLGIVTWRQT
MRVYIQDVWNKCDLVAIMLFIIGLICRMFESSYGFGRDVLCVDYMVFTLRLIHIFAIHKQ
LGPKIIIVGKMMKDIFFFLFFLMVWLMAYGVANQALLYSYDPRLDHIFRRVFYRPYLHIF
GQIPVEEMDGNIIFGKEWDMECTDNVTLIQGGAEPCRSLSNNWLVVILLIVYLLVTNILL
INLLIAMFSHTFTVVQANSDIYWKFQRYNLIVQYHSRPSLAPPFIILSHINLIIKRNIRK
VPSLKIHHFVLQLSKKETNRLMTWETIQKEDFLTAQTKIQRNSDSERLKRMSVKVDGVVK
HMAENRDFDHRLRALENEMEYCSNALSWIVDTLAQGSTFKPPRPPPILKDEFASSPNSA
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagagacacaggagaaggaggcggcggagacaaaaccagtaaaaccgagaaggaccag
agttggatccccaaaatcatcaagaaaagagtgtgcaccacctttgtagaagattcttta
agtaatggcgtgcagtgtcagtgtgggggtgcaagagatgcccatgcctctgtggctctc
ggtgactatttcagcactgcgatggtcaaccactgggacagcgcccagcactcctctgaa
tacccaactgatgcctttggagaactgcagtttgtaggggtcagcaggaggcatagctat
ttcctgcgtctgtcatgggacacacctccgtctgcggtctacaacctgatgacgggcaac
tggggacttcctgcacccaacctggtggtttctgtagtgggcggagaagacaggacaaag
gtgaaaacttgggtacgggaggtcctcaggcagggactggtgaaagcctcacaaagcaca
ggagcgtggatcgtgacaacaggcatgcgtgaaggtgttggcggatgtgttggagaggca
gtgagggatcatgccactgcagcttcgtcggtctccctcaacaaggtggtggcactgggc
attgctccctgggggatggtgcagaaccgacagcagctggtaaaccctcagggcagcttt
cctgccaagtactccatcgagaacacttccaaagacttctgctgcctagacaacaactac
caggccttcctgctggtggacgacgggactgtgggacgcagaggaggagagaccaggttc
agggccaaagtggaggagtacatctcccaccagcgcacaggcatctggggcagcggcagc
attgacatccctgtcctttgtatgctggtatctggggaggcaagcatgctggagagagtg
gatcgttctctgaaaacctgcatgccctggctggtgctggccggctcagggggcttggct
gacttcttgagcgatgtcttggagaatctgtcattagcgccggcttccaatgaggtagat
ggcgaggtgggtcccagcgtggacctgaaagaccgagtggcagaacggtttaagaagcac
ttcccttctgaagcagagtcagacaaactagttgagcgggctttgagcatctaccagaac
agagactttattacattctaccatggagagcaggagggcccaaacgactttgatacagtc
ctgctcaaaacgttggtgcaagctagtaagcagcgcacgtcagctgatgccagcccctac
agtgaagagctgaagctagcagtcacatggaacagggttgacattgctaagagtgaactc
tttaacggagacatccaatggaggtatgaagacttggaagactccatgacagatgccctg
atcaacaacaagcctcagtttgtgcgtcttttcactgagaatgggctcaacatcatggag
tacctgacttatggcaggctggaaaacctctttcgttctgtggctgacgggacggtgctt
taccaactacttcagtgccgtctggtggaacggctaggaacttcaccccctgttcccaca
tttacaaacctgcaggactcttcaaatgtggcagcagggaagagcagcccagtggcggat
atcagcctttttgaggttgcaggtgtcctggacctgttgatgggagacgtctgccagtca
ttttactatgatgctttgggtttagaacagacgtcatccaaaaggagagctcttaggcgt
gccagcaagctgctgcgcagtgactgcatgtatagggcagagcgctgcccctacccctgg
gcttcactcttcatctgggctgtcctccagaaccgcagcgaaatggccatttacttctgg
gagatgtcagtggagtcagtgctgagtgctctgagtggctgtaagatactgagggaactt
tccaagctggaggatgaaactgagactaaactgtccatgaaagagctggctcagaggttt
gagaacctggcacatgatgtcttcggctcttgctatcggagcaatgagagtcgctctttc
accctgctgattacacaatctcaagtttgggctgggaccacctgcctccagatgggcatg
ggcgccgacgcacgccttttcttcagccatgatggagtacagactctgttgtcccagatc
tggtggggtgacatgaaaaggaacacagaggtgtggaagctcctactcaccttcttctgt
cccttcctctgctacaccaacctcatcaccttcaggaaacaggaggaccatcagcaagag
gagggggggggggagcccaatgaggacggacagggcagggacagcgacagcctctacggc
accacaatcttctctttctcggacatcaagaacattgaagctgatgcacaaggatcaacc
agtcccaggacagcagccatcaaaggcatacctcactctcacacaccaccaaagcgtccg
ttcatagtttcaagatggcgtcagttctggtttgcacctgtcacctcttttttgggcaac
gtcctgatgtacttcctcttcctcctgctgtttgcatacgtgctgatggtggacttcaag
cccccgcctccctctggtccatccaacactgagtatgtgctttacttctgggtgttcacc
attgtgtgtgaggagatccgggagacgttctttctggggatagtgacttggcgtcagacg
atgagagtttacattcaggatgtgtggaacaagtgtgacctcgttgccatcatgctgttc
atcataggactgatctgcaggatgttcgagtcgtcatatgggtttggccgggatgtcctg
tgtgtggactatatggtcttcaccctccgtctcattcacatcttcgccattcacaaacag
ctgggaccaaaaatcatcattgttggcaagatgatgaaggatatcttcttcttcctcttc
ttcctgatggtgtggctcatggcgtacggagtagccaatcaagctttactttactcttac
gaccctcgtctagatcacatctttcgtcgggttttctacaggccatacttgcacatcttt
ggacagatccctgtggaagagatggatggtaacattatctttgggaaagagtgggatatg
gagtgcacagacaatgtgacactaattcagggcggtgcggagccgtgcagatctctgtct
aataactggctggtggtaattctgctgattgtttatctgctggtcaccaacatcctgctc
atcaacctgctcatcgccatgtttagccataccttcactgtagtgcaggctaacagtgac
atctactggaagttccagcgctacaacctgattgttcagtaccactcccgtccttccctg
gctcctcctttcatcatcctctctcacatcaatctcattatcaagaggaacatccgcaag
gtgccctctctcaagatccaccactttgtattgcagttgtcaaagaaggaaactaacagg
ttaatgacgtgggaaacaattcagaaggaggacttcctcactgcccagaccaagatccag
agaaacagtgactcagagaggctcaaacggatgtctgtcaaagtggatggtgtggttaaa
catatggctgaaaacagagactttgaccacaggctgagggctctggagaatgagatggag
tattgctcaaatgctctcagctggattgtggatactttggcgcaaggcagcacgtttaaa
cctcctcggcctccacctatattaaaagatgagtttgcctcttctcccaattcagcctga
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