Micropterus salmoides (largemouth bass): 119916150
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Entry
119916150 CDS
T07309
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
msam03460
Fanconi anemia pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119916150
09124 Replication and repair
03440 Homologous recombination
119916150
03460 Fanconi anemia pathway
119916150
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119916150
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119916150
03036 Chromosome and associated proteins [BR:
msam03036
]
119916150
03400 DNA repair and recombination proteins [BR:
msam03400
]
119916150
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119916150
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119916150
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119916150
Multi subunit Ring-finger type E3
BRCC complex
119916150
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119916150
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119916150
BRCA1-A complex
119916150
BRCA1-B complex
119916150
BRCA1-C complex
119916150
BRCA complex
119916150
FA (Fanconi anemia) pathway
Downstream FA components
119916150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
RTT107_BRCT_5
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-RING_5
zf-MIZ
zf-ANAPC11
zf-RING_4
TRAF3_RING
zf-RING_10
zf-rbx1
Exostosin
Motif
Other DBs
NCBI-GeneID:
119916150
NCBI-ProteinID:
XP_038591980
LinkDB
All DBs
Position
Unknown
AA seq
1399 aa
AA seq
DB search
MAPELTPKSKKTSFFPNITMKTPNATDIKRGISVLWETLQCPICLDLMTAPVSTKCDHQF
CKFCMMKLLENTKQNRVNCPVCKAKITKRSLQESPGFQRLVVGLQDMIQAYEHDTGTNYL
TGMPQQNRQAGATNAEATKNCHDVSSGETPGLYWDNAENNYDLPRSCSSTVAAQNGYARL
MELEDTSPLTTENEGLDSGLGEAPPTSDKKMHSPSSIPDETEHRPLRKSLRKKPKKDNDK
ILDHKQKKSLEKVAEWLMKVPTEGSLELEKPNDDAEDSDSCSSSSTIDVKQHNSDVNPRR
ADRAKALEEQVFGAVYKRERRGNRSVSLPLNVFVEPPTIKKTQTASKRKKKNTLTPAKSS
SGDKDESDMEEEQQVIDEVKNTSSDIFKEAEENGEDEILCPSSDVRQQQPEGKSKKRMCD
TLQQFDSDLQEQAKAKSESTEEKKSDKRKGKSIRSQKGKPARAPKPLVLVGVQNEETKTR
PRSEEVQVHIENYPSSEDQEIPVTRSNRRSRRLQLFAEEVQEGHKKANLRGDIPEKDRNA
AKQSEDAKGGTLDKTASPKHGNMTKGAERNGCICDQDLGGIENMDSGVRTSYLKSTENAE
VPNAETVSEASAACYASVVPNSTSPTEAGVLDATLESDSPKSNFPNNIQLETSACETKCA
GTENEEEKNDSEVDTEQLLWSFKATKRKSFHLGGPNVKRSRSVDEENMQGAKTEENQRVC
SGVGSAKNQIHKKTSRITNQEALRDNENSSCSDLISPSISPGLTRKRFVEKPDQVVVEAS
IPESSCSSQDIAGGHCISRDSISSALTPNKVSKCERESPHLSVVPQVVDSGLLFTAVEHE
KLNAPSKYSTITENRLDCTVRDAGRVEEMRDSVSAASGKHSGNAAEQSLNTESSLTPDGL
GIPVVQIVHEAKSYSGSSGQLSAHSSIKSMPRKRTRAQRLESSSESDCSGEGLPTLTEIF
GMSAPPSAVTQDQGDSGEANNRCGGVKADAAEHLSRPPACPSPECIDSSQASVDLFGTPD
ECDVPVNDTGVSMESSQFSSEVLVTQQKIAMQKELVRLEKLMALVSEVLQEKEESPTKEV
PSETKQSSKTTGPDTHRPLPCDQGTVQGSDLKAVPEAEREPSTGPSDGKGAPQPTAEMSM
QRSTHKGNNVTGTGASKTLSSSSAVKTLKNDGSPSDAQEDKENNTPLRDRSKAKMVLVTS
GLGPNEQIMVKKFAKRVGVRVVSQVTPEVTHIIMHTDEQLVCERTLKYFLGIAGRKWVVS
FQWISECFKQKKLLDESLYEVKGDVVNGPNHQGPMRARTTKDNNLLMKGYKICFQGPFTD
MTTDEMEWMVELCGAAVVKDPLLLDSKQKSHQLVIVQPGSESSSSTSSSLSTQATVVTRG
WLLDTVATYTLQNYKKYTT
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgagttaactccaaaatctaagaaaacaagcttttttccaaacatcaccatg
aaaaccccaaacgccacagatatcaaaagggggatttcagtcctttgggagactctgcag
tgtcccatatgcttggatttaatgactgcacctgtgtctactaagtgtgaccatcagttt
tgcaaattttgtatgatgaagcttttggaaaacaccaaacaaaacagggttaactgtcca
gtgtgtaaagccaagataactaaaaggagcttacaggagagccctgggtttcagagactt
gtagtaggattgcaggacatgatacaggcatatgaacatgacactggcacaaactactta
actggtatgccccagcaaaacagacaagcaggagccacaaatgctgaagctactaaaaac
tgtcatgatgtgtcatctggagagacacctggcctttactgggacaatgcggaaaacaat
tatgatcttccaaggtcttgctcctcaactgtagcagcccagaatgggtacgcaagactt
atggagcttgaagacacaagtcctttgacaacagaaaatgaaggcctggacagtggcctt
ggagaggcgccgccaacttctgacaagaaaatgcacagcccttcatcaatcccagacgag
actgaacacagacctttaagaaagtccttaaggaagaaaccgaaaaaggataatgacaag
attcttgaccacaaacagaagaaaagtctagagaaagtcgccgagtggctcatgaaagtt
ccaactgaaggaagtctcgagttagagaaacccaacgatgacgccgaggactctgacagc
tgttcttcctcttcaacaatagatgtcaagcaacacaatagtgatgtgaatcctaggaga
gcggatcgggccaaagcccttgaggagcaggtgttcggggccgtctacaaacgagagcga
agagggaacaggagcgtctctcttccgcttaatgtatttgttgaaccaccaacaattaaa
aaaacccagacagcttccaaaagaaagaagaaaaacactctcactcctgctaaatccagc
tctggagataaagatgaaagtgacatggaagaagagcaacaagtgatagatgaagtaaag
aacaccagcagtgacatttttaaagaagcagaggaaaatggcgaagatgagattctgtgt
ccctcgtctgatgttagacaacagcaacccgaaggaaagtcaaagaaaaggatgtgtgat
actctgcagcagttcgacagcgatttgcaagagcaagctaaggcaaagtcagaaagtact
gaggaaaagaaaagtgacaagaggaaaggtaaaagcataaggtcacaaaaaggcaagcct
gctagagcgccaaaaccccttgttttggttggagttcaaaatgaagaaactaagactaga
ccaaggtcagaagaagtccaagttcatattgagaattaccctagcagcgaggaccaagaa
atccctgtcacaaggagcaacaggagaagtagaagacttcaactcttcgcagaggaagtc
caggaaggacacaagaaagcaaatttgagaggcgatatacctgaaaaagacagaaatgct
gcaaagcaatctgaggatgccaaaggtggaacattggataagacggcatcacctaagcat
ggaaacatgacaaagggagctgaaagaaatggatgtatttgtgatcaagacttaggagga
atagaaaacatggactctggtgtgaggacgtcttatttgaaatcaacagaaaatgctgaa
gtgccaaatgctgaaactgtgtctgaagctagcgctgcttgttatgcctccgtggtccca
aattctacaagtccaactgaagcaggtgtgctagatgctacgcttgaaagtgacagtcca
aagagtaatttcccaaacaatattcagctggagacctccgcttgtgagactaaatgcgct
ggaacagaaaacgaggaggaaaagaatgacagcgaggtggacacagagcaactgctgtgg
agcttcaaagccactaaacggaaatccttccacctgggaggtccaaatgtgaaaaggagc
cgtagcgtagatgaagaaaacatgcagggtgccaaaacagaggagaaccagcgcgtttgt
tctggtgttggatctgcaaaaaatcagatccataaaaagacatctagaatcacaaaccaa
gaggcattgagagacaatgaaaactcatcttgtagtgatttgatctccccttccatctca
cccggcctgacaagaaaaagatttgttgagaaaccagatcaagttgtggtagaagcctcg
atccctgagagcagttgttcaagtcaggacattgctggtggtcactgcatctccagggat
agcattagcagtgcccttactccaaataaagtctcaaagtgtgaaagagaaagtcctcat
ctttctgttgtgcctcaggtagtagattctgggctgctcttcacagccgttgaacacgag
aagctaaatgcaccctcaaagtattctacaatcacagagaatcgccttgattgtaccgtg
agagacgctggcagagtggaggagatgagagacagcgtttcagccgccagtgggaaacac
tcgggcaacgccgccgaacaatctttaaacacagagtcttctttaacccctgatggcctt
ggaataccagttgtacaaatcgtccacgaggcgaaatcgtacagcggcagtagcggacag
ctcagcgcccattcctccatcaagagcatgcccaggaagaggacaagggcccagaggctc
gaatcctcatcggagtcagattgcagcggagagggattaccgacattgactgaaattttt
ggaatgtcagcccctccctctgctgttacccaggatcagggagactccggtgaagctaac
aacagatgtgggggcgttaaagctgatgcggcggaacacttgagccgtccacctgcgtgc
cccagccctgaatgcattgacagcagccaagcgtctgtggacttgtttggcacgccagat
gaatgtgatgttccagtaaatgacaccggcgtttccatggaatcgtcacaattttcaagc
gaagtccttgtcacacagcaaaagatagcaatgcagaaggagctggtgaggttggagaag
ttgatggctctggtgtcagaggtgcttcaggagaaagaagaaagtcccaccaaagaagtt
ccctcagaaacaaagcagagcagcaaaaccacaggcccagacacccacagacccctcccg
tgtgaccagggcacagtccaaggatcagacctcaaagctgtgcctgaagcagaacgagag
ccgagcacaggaccgtctgatggcaaaggggccccccagcccaccgcagagatgtccatg
cagcgatccacgcacaaaggaaacaatgtaacaggcaccggagcctccaagacacttagt
tcaagttcagcagtcaaaactttaaagaatgatggttcaccatcagatgcacaagaagac
aaagaaaataacactcctctaagagatagaagtaaagctaagatggtgctagtgacatct
gggttaggccccaatgaacagataatggtgaaaaagtttgccaagcgagttggtgtccgt
gtggtttcccaggtgactccagaggtgacccatattataatgcacacagatgaacaactg
gtatgtgagcgcacgctgaagtatttccttggcattgcaggcaggaagtgggtggtgagc
ttccagtggatatcagagtgcttcaaacaaaagaagctcttagatgagagtctctatgaa
gttaaaggtgatgtggtgaatgggccaaaccaccagggccccatgagagctcgcaccact
aaagacaataacttactcatgaagggctacaagatctgcttccaagggccttttacagac
atgactacagatgaaatggagtggatggtggagctctgtggagcagctgtagtcaaagat
ccacttctcctcgacagtaaacagaagtcccatcagctggtcattgtacagcctggatca
gagtcgtcatcatccacatccagcagtctttctacacaagccacagttgtgacacgtggt
tggctgttggacaccgtggcaacctatacccttcaaaactacaagaaatacacaacatga
DBGET
integrated database retrieval system