KEGG   Micropterus salmoides (largemouth bass): 119916150
Entry
119916150         CDS       T07309                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03440  Homologous recombination
msam03460  Fanconi anemia pathway
msam04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119916150
  09124 Replication and repair
   03440 Homologous recombination
    119916150
   03460 Fanconi anemia pathway
    119916150
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:msam01009]
    119916150
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msam04121]
    119916150
   03036 Chromosome and associated proteins [BR:msam03036]
    119916150
   03400 DNA repair and recombination proteins [BR:msam03400]
    119916150
Enzymes [BR:msam01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119916150
Protein phosphatases and associated proteins [BR:msam01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119916150
Ubiquitin system [BR:msam04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119916150
  Multi subunit Ring-finger type E3
   BRCC complex
    119916150
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     119916150
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     119916150
    BRCA1-A complex
     119916150
    BRCA1-B complex
     119916150
    BRCA1-C complex
     119916150
    BRCA complex
     119916150
   FA (Fanconi anemia) pathway
    Downstream FA components
     119916150
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 RTT107_BRCT_5 zf-C3HC4_4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-Nse zf-RING_5 zf-MIZ zf-ANAPC11 zf-RING_4 TRAF3_RING zf-RING_10 zf-rbx1 Exostosin
Other DBs
NCBI-GeneID: 119916150
NCBI-ProteinID: XP_038591980
LinkDB
Position
Unknown
AA seq 1399 aa
MAPELTPKSKKTSFFPNITMKTPNATDIKRGISVLWETLQCPICLDLMTAPVSTKCDHQF
CKFCMMKLLENTKQNRVNCPVCKAKITKRSLQESPGFQRLVVGLQDMIQAYEHDTGTNYL
TGMPQQNRQAGATNAEATKNCHDVSSGETPGLYWDNAENNYDLPRSCSSTVAAQNGYARL
MELEDTSPLTTENEGLDSGLGEAPPTSDKKMHSPSSIPDETEHRPLRKSLRKKPKKDNDK
ILDHKQKKSLEKVAEWLMKVPTEGSLELEKPNDDAEDSDSCSSSSTIDVKQHNSDVNPRR
ADRAKALEEQVFGAVYKRERRGNRSVSLPLNVFVEPPTIKKTQTASKRKKKNTLTPAKSS
SGDKDESDMEEEQQVIDEVKNTSSDIFKEAEENGEDEILCPSSDVRQQQPEGKSKKRMCD
TLQQFDSDLQEQAKAKSESTEEKKSDKRKGKSIRSQKGKPARAPKPLVLVGVQNEETKTR
PRSEEVQVHIENYPSSEDQEIPVTRSNRRSRRLQLFAEEVQEGHKKANLRGDIPEKDRNA
AKQSEDAKGGTLDKTASPKHGNMTKGAERNGCICDQDLGGIENMDSGVRTSYLKSTENAE
VPNAETVSEASAACYASVVPNSTSPTEAGVLDATLESDSPKSNFPNNIQLETSACETKCA
GTENEEEKNDSEVDTEQLLWSFKATKRKSFHLGGPNVKRSRSVDEENMQGAKTEENQRVC
SGVGSAKNQIHKKTSRITNQEALRDNENSSCSDLISPSISPGLTRKRFVEKPDQVVVEAS
IPESSCSSQDIAGGHCISRDSISSALTPNKVSKCERESPHLSVVPQVVDSGLLFTAVEHE
KLNAPSKYSTITENRLDCTVRDAGRVEEMRDSVSAASGKHSGNAAEQSLNTESSLTPDGL
GIPVVQIVHEAKSYSGSSGQLSAHSSIKSMPRKRTRAQRLESSSESDCSGEGLPTLTEIF
GMSAPPSAVTQDQGDSGEANNRCGGVKADAAEHLSRPPACPSPECIDSSQASVDLFGTPD
ECDVPVNDTGVSMESSQFSSEVLVTQQKIAMQKELVRLEKLMALVSEVLQEKEESPTKEV
PSETKQSSKTTGPDTHRPLPCDQGTVQGSDLKAVPEAEREPSTGPSDGKGAPQPTAEMSM
QRSTHKGNNVTGTGASKTLSSSSAVKTLKNDGSPSDAQEDKENNTPLRDRSKAKMVLVTS
GLGPNEQIMVKKFAKRVGVRVVSQVTPEVTHIIMHTDEQLVCERTLKYFLGIAGRKWVVS
FQWISECFKQKKLLDESLYEVKGDVVNGPNHQGPMRARTTKDNNLLMKGYKICFQGPFTD
MTTDEMEWMVELCGAAVVKDPLLLDSKQKSHQLVIVQPGSESSSSTSSSLSTQATVVTRG
WLLDTVATYTLQNYKKYTT
NT seq 4200 nt   +upstreamnt  +downstreamnt
atggcccctgagttaactccaaaatctaagaaaacaagcttttttccaaacatcaccatg
aaaaccccaaacgccacagatatcaaaagggggatttcagtcctttgggagactctgcag
tgtcccatatgcttggatttaatgactgcacctgtgtctactaagtgtgaccatcagttt
tgcaaattttgtatgatgaagcttttggaaaacaccaaacaaaacagggttaactgtcca
gtgtgtaaagccaagataactaaaaggagcttacaggagagccctgggtttcagagactt
gtagtaggattgcaggacatgatacaggcatatgaacatgacactggcacaaactactta
actggtatgccccagcaaaacagacaagcaggagccacaaatgctgaagctactaaaaac
tgtcatgatgtgtcatctggagagacacctggcctttactgggacaatgcggaaaacaat
tatgatcttccaaggtcttgctcctcaactgtagcagcccagaatgggtacgcaagactt
atggagcttgaagacacaagtcctttgacaacagaaaatgaaggcctggacagtggcctt
ggagaggcgccgccaacttctgacaagaaaatgcacagcccttcatcaatcccagacgag
actgaacacagacctttaagaaagtccttaaggaagaaaccgaaaaaggataatgacaag
attcttgaccacaaacagaagaaaagtctagagaaagtcgccgagtggctcatgaaagtt
ccaactgaaggaagtctcgagttagagaaacccaacgatgacgccgaggactctgacagc
tgttcttcctcttcaacaatagatgtcaagcaacacaatagtgatgtgaatcctaggaga
gcggatcgggccaaagcccttgaggagcaggtgttcggggccgtctacaaacgagagcga
agagggaacaggagcgtctctcttccgcttaatgtatttgttgaaccaccaacaattaaa
aaaacccagacagcttccaaaagaaagaagaaaaacactctcactcctgctaaatccagc
tctggagataaagatgaaagtgacatggaagaagagcaacaagtgatagatgaagtaaag
aacaccagcagtgacatttttaaagaagcagaggaaaatggcgaagatgagattctgtgt
ccctcgtctgatgttagacaacagcaacccgaaggaaagtcaaagaaaaggatgtgtgat
actctgcagcagttcgacagcgatttgcaagagcaagctaaggcaaagtcagaaagtact
gaggaaaagaaaagtgacaagaggaaaggtaaaagcataaggtcacaaaaaggcaagcct
gctagagcgccaaaaccccttgttttggttggagttcaaaatgaagaaactaagactaga
ccaaggtcagaagaagtccaagttcatattgagaattaccctagcagcgaggaccaagaa
atccctgtcacaaggagcaacaggagaagtagaagacttcaactcttcgcagaggaagtc
caggaaggacacaagaaagcaaatttgagaggcgatatacctgaaaaagacagaaatgct
gcaaagcaatctgaggatgccaaaggtggaacattggataagacggcatcacctaagcat
ggaaacatgacaaagggagctgaaagaaatggatgtatttgtgatcaagacttaggagga
atagaaaacatggactctggtgtgaggacgtcttatttgaaatcaacagaaaatgctgaa
gtgccaaatgctgaaactgtgtctgaagctagcgctgcttgttatgcctccgtggtccca
aattctacaagtccaactgaagcaggtgtgctagatgctacgcttgaaagtgacagtcca
aagagtaatttcccaaacaatattcagctggagacctccgcttgtgagactaaatgcgct
ggaacagaaaacgaggaggaaaagaatgacagcgaggtggacacagagcaactgctgtgg
agcttcaaagccactaaacggaaatccttccacctgggaggtccaaatgtgaaaaggagc
cgtagcgtagatgaagaaaacatgcagggtgccaaaacagaggagaaccagcgcgtttgt
tctggtgttggatctgcaaaaaatcagatccataaaaagacatctagaatcacaaaccaa
gaggcattgagagacaatgaaaactcatcttgtagtgatttgatctccccttccatctca
cccggcctgacaagaaaaagatttgttgagaaaccagatcaagttgtggtagaagcctcg
atccctgagagcagttgttcaagtcaggacattgctggtggtcactgcatctccagggat
agcattagcagtgcccttactccaaataaagtctcaaagtgtgaaagagaaagtcctcat
ctttctgttgtgcctcaggtagtagattctgggctgctcttcacagccgttgaacacgag
aagctaaatgcaccctcaaagtattctacaatcacagagaatcgccttgattgtaccgtg
agagacgctggcagagtggaggagatgagagacagcgtttcagccgccagtgggaaacac
tcgggcaacgccgccgaacaatctttaaacacagagtcttctttaacccctgatggcctt
ggaataccagttgtacaaatcgtccacgaggcgaaatcgtacagcggcagtagcggacag
ctcagcgcccattcctccatcaagagcatgcccaggaagaggacaagggcccagaggctc
gaatcctcatcggagtcagattgcagcggagagggattaccgacattgactgaaattttt
ggaatgtcagcccctccctctgctgttacccaggatcagggagactccggtgaagctaac
aacagatgtgggggcgttaaagctgatgcggcggaacacttgagccgtccacctgcgtgc
cccagccctgaatgcattgacagcagccaagcgtctgtggacttgtttggcacgccagat
gaatgtgatgttccagtaaatgacaccggcgtttccatggaatcgtcacaattttcaagc
gaagtccttgtcacacagcaaaagatagcaatgcagaaggagctggtgaggttggagaag
ttgatggctctggtgtcagaggtgcttcaggagaaagaagaaagtcccaccaaagaagtt
ccctcagaaacaaagcagagcagcaaaaccacaggcccagacacccacagacccctcccg
tgtgaccagggcacagtccaaggatcagacctcaaagctgtgcctgaagcagaacgagag
ccgagcacaggaccgtctgatggcaaaggggccccccagcccaccgcagagatgtccatg
cagcgatccacgcacaaaggaaacaatgtaacaggcaccggagcctccaagacacttagt
tcaagttcagcagtcaaaactttaaagaatgatggttcaccatcagatgcacaagaagac
aaagaaaataacactcctctaagagatagaagtaaagctaagatggtgctagtgacatct
gggttaggccccaatgaacagataatggtgaaaaagtttgccaagcgagttggtgtccgt
gtggtttcccaggtgactccagaggtgacccatattataatgcacacagatgaacaactg
gtatgtgagcgcacgctgaagtatttccttggcattgcaggcaggaagtgggtggtgagc
ttccagtggatatcagagtgcttcaaacaaaagaagctcttagatgagagtctctatgaa
gttaaaggtgatgtggtgaatgggccaaaccaccagggccccatgagagctcgcaccact
aaagacaataacttactcatgaagggctacaagatctgcttccaagggccttttacagac
atgactacagatgaaatggagtggatggtggagctctgtggagcagctgtagtcaaagat
ccacttctcctcgacagtaaacagaagtcccatcagctggtcattgtacagcctggatca
gagtcgtcatcatccacatccagcagtctttctacacaagccacagttgtgacacgtggt
tggctgttggacaccgtggcaacctatacccttcaaaactacaagaaatacacaacatga

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