Micropterus salmoides (largemouth bass): 119916194 Help Entry 119916194         CDS       T07309                                  Name (RefSeq) protocadherin-15-like isoform X1   KO K16500   protocadherin-15 Organism msam  Micropterus salmoides (largemouth bass) Brite KEGG Orthology (KO) [BR:msam00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:msam03037]     119916194    04515 Cell adhesion molecules [BR:msam04515]     119916194 Cilium and associated proteins [BR:msam03037]  Primary cilia and associated proteins   USH complex and associated proteins    119916194 Cell adhesion molecules [BR:msam04515]  Cadherins   Protocadherins    119916194 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Big_9 Motif Other DBs NCBI-GeneID:  119916194 NCBI-ProteinID:  XP_038592050 LinkDB All DBs Position Unknown AA seq 1813 aa AA seqDB search MVVKMVITHLMGPLSCGLVKWPSIMRTGVLYLLLLSTCLSQDTDDWQYEECKLSRSGPPA TIVAIDEESPNGTLLVENMQINGVAEGPDRTISLSLRDNHEHWVILDSSKQALYLNSTGR VLDRDPPSYIQSIVVQVQCTNELVGTVILHEVRIVVRDRNDNAPRFQQPRYYVAVSELTP VGTTIFSGFSGNNGATDIDDGPNGQIEYTIQYNPKEPTTNRTFDIPLTLFGSVVLRERLN YEEITRYLVIIQANDRAPYPSERRTATTTLTVDVLDGDDLGPMFLPCALVGNTRDCSPIT YRANVLELTEPNKVNPLNVTPPIQAVDQDKNIQPPSDRPGIIYSILIGKPESYAEYFSLN RTTAELLLLKPIDRELYRRFDLVIKAGQDNGHPLPAFANLQIEVLDENNQAPYFLETSYH GYVSEASPVGTTVATSASLSAPLAIIALDNDVEETRDPQLQLSLDTYHDVFSVSATGIRR YLTLVQPLDRETQDSYTFTLSASDGVQHSIPVTVTITVLDANDNTPTFANVSYNVNLFTD KMPGETVLQLSAVDSDAGPNGQVTYRILAGDQGHFLIGNSTGVITVAPGVDLTVGRSYAL TVEAIDNGHVPHRRSSITTVYIEVLPPNNQSPPRFPRQQYNMEISEAMRTGATLLNLQAV DRERDPITYKIHSGDHDGHFALQQNSGYLVLDKPLDRESVDYYTLVVTASDGHPGETSTA TVNIVVTDVNDNDPLFNSSLPVNLTVTEEQDHAYVGQVKATDPDLGPSGQVHYRLVNHQK LFSINATGAITTAVPLDREVKGHYFLIVEAWDGAVDPRRSRLTLSVTVLDVDDNSPIFTQ QTYNVSLPENSPKDTVILQLKAIDADLGSNITYRIRTEGLDQNIVQLFHIDPVTGKLSVL KILDYEALTDSEPTYTFTVEAMDTEGTMPPGLASVTVRIMDMNDFSPVFRQSVYRGMVAP NAVKGTIVTTVMANDSDPAGTPAGLVSYKVDQEAYPYSASIFDVEEKTGNVVTRVNLNEE PNLKFSLVVVAYDHGEPAKENTTLVEITVLQPSAIPVFTQEEYRFPPVSEEAAVGTLVGA IMATAVNQTIVYFIIEGNERGVFALNETTGVISTAKRLDYETSSSYVLKVEADSMRLASS NLRAPSKTNTAKVVIDVQDENDHSPVFTTSLYIGGVAEDAKTFTSILQVQALDRDTGNYS SIMYRLIIPPPAGKDTKDSKDGFVIEPYSGVVKTAIMYRNMRRSYFKFEVVATDNYGHGH SSKAEIVVSVVNQLDMQVVVSNVPPTYVEKNKDKLLSILERYVQEQIPGAKVVVETIGPH RYGDGMEQEDYTKSDLMIYAIDPLTNRAVSSQELYKFLDGKLLDINKEFNPFLPPGGRIL EIRTPEVVTSVKKAVQTVGYTEGALLALAVIIIICCVPAILIVIITYRQFKERQAECAKT ARIQMALPTGKPGGGTANNLYEELGDNAMRGYGQHETQQLLRPSLLRPEELSMESGIDPG QDYYTQDYYNYDHGYELPQYGSRRKLISPSGLYDEYGEVVVDDDGSYYYSPQESDGEHGS RKRRIKLVVDREYETSSTGEDSVPETQRSRLTSTLNSHANVNGSIYMAQNGSIIRTRRSV NTTGPPHTHGNTNNNLKLTSPVLSSRLAKHFKKLDKMAATLEERVPLNSPRTDVGCKTLR TFQSPGMAASATASSLLSNTDNNKTPNVFNTRQSSVSLGSTSTSNTGTESVASKLNLLKA AHCGTDRPQKPAEREELKEGERESKVDSSNDEDTEDGLLMRETLECPSDRTQSDEEELWM GPWNSLHIPMTKL NT seq 5442 nt NT seq  +upstreamnt  +downstreamnt atggtggtgaagatggttataacgcacttaatggggccgctgtcatgtggcctggtcaaa tggccgagtataatgagaacaggagtcctttatctgctgctgctatcaacctgtctcagc caagacacagacgactggcaatatgaggaatgtaaattgtctcggtcgggtcctcctgct accatcgttgccatagacgaagaaagccccaacggaacgttattggtggagaacatgcag ataaatggagtggctgagggtccagatcgtaccatctctctgtctctaagggataaccat gaacactgggtgatccttgactcttccaaacaagccctttacctcaacagcaccggacgg gttctggatagagatcccccttcatatattcaatccattgtggttcaggttcagtgtacc aatgagctggttggcacagtgattttacatgaagtccgcatcgtcgttcgagaccgcaat gacaacgcaccacgtttccaacagccaagatactatgttgctgtcagtgagctgacacca gtaggaaccactatcttctccggcttctctgggaacaatggggcaacagacattgatgac ggtcccaatggacagatagagtacaccattcagtacaacccgaaagaaccgacaacaaac agaacttttgacatccccctgacactgtttggctcagtagttctcagagaaagactcaac tatgaggagataacgcggtacctggtcatcatacaggcaaatgaccgagcaccctatccc agtgagcgccgcacagccaccaccactctaactgtggatgtactggatggtgatgacttg ggtcctatgtttctaccatgtgcgcttgtgggaaacacccgtgactgtagtcccattaca tatagggctaatgtactggaactgacagagccgaataaggtgaatcctctcaatgtcact ccacctattcaagctgtggaccaagacaaaaacatacaacctccctctgaccggccaggg attatatactccatcctcattggcaaaccagagtcctatgcagaatatttcagcttgaac agaaccacagcagagctccttctactcaagcccatcgatagagaactctaccgcagattt gatctggttatcaaggcagggcaggacaacggccaccccttgccagctttcgccaacctc caaatcgaagttctagacgagaacaaccaggcaccctacttcctggagaccagttaccat ggctacgtcagtgaggcatcaccagttggaaccaccgtagcaaccagtgccagcctgtct gcaccacttgccatcatagcgctggataacgatgtggaggagaccagggatcctcagctc cagttatcattggacacctatcatgatgttttctctgtgtctgctactggaatcagaaga tatctcaccctggtgcagcccctggacagagagacacaagactcctatacgttcacgctt tcagcatcagacggtgtccagcacagcattccggttacagtgacgataacagtgttggat gcaaatgacaacactcccacttttgctaatgtctcttataatgtcaacctgtttactgat aagatgcctggagaaaccgtgttacagctgtcagcagttgactctgatgcaggtcccaac ggtcaggtcacctaccggatcctggctggtgaccaaggacattttcttattggcaacagc actggggtcattactgtggcaccaggtgtcgatctcactgttgggcggagctacgctttg actgtagaagccatagacaacgggcatgttcctcataggaggtcatccatcactacggtc tatattgaagttttgcccccgaacaaccagagccctcctcgtttccctagacagcaatac aacatggagatcagcgaagctatgagaactggagctacactgcttaatctgcaggcagtg gatcgggagagggaccccatcacctacaaaatccacagcggagaccacgatggacatttt gcactgcagcagaactcagggtatttggttctagacaagcctctggacagggagtctgtg gattattataccctggtggtcacagcctcagacggacacccaggcgagacctccactgcg acggtgaacattgtggtgacagatgttaatgacaacgacccgctgttcaattcttcactg ccagtgaacctcactgtcacagaggagcaggatcacgcctacgttggacaggtcaaggct acagatccagatctgggaccaagtggtcaggtccattatcggctcgtcaaccaccagaag ctgttttccatcaatgctaccggagcgatcacaactgcggtgccactggatagagaggtg aaaggtcactactttctgatcgttgaagcctgggatggtgcagtggaccctcggcgatcc agattaacactgtctgttaccgttctggatgtagacgacaacagcccgatattcacccaa caaacttacaatgtcagcctaccagagaacagccccaaagatacagtcatattacagtta aaggcgatagatgctgacctcggctccaacatcacatatcgaatcagaactgaaggcttg gaccaaaacattgttcaactattccacatcgaccctgtgacaggaaagttgtcagttctc aaaattctggactacgaggctctgactgactcagaacccacatacacattcactgttgag gccatggacacagagggaaccatgcctcctggactagcctctgttactgtcagaatcatg gacatgaatgacttttctccggtcttcagacagtcagtgtaccgaggcatggttgcccct aatgctgtcaagggaaccatcgtaaccacagtgatggccaatgactctgaccctgcgggt accccagcaggtctagtgagctataaagtggaccaggaggcttatccatattctgccagt atatttgatgtggaggaaaagaccggaaatgtggtaaccagagtaaacctcaatgaggag cccaacctcaagtttagcctggtggtggtggcctatgatcatggtgagcctgcaaaggag aacacaactctcgtagagataacagtccttcagccttctgccattcccgtgtttactcag gaagaatacaggtttccaccagtgagcgaggaggctgctgttggaaccctggtgggagcc atcatggcaactgctgtcaatcagactattgtctacttcatcattgaaggcaacgaaaga ggtgtgttcgcgttaaatgaaacaacaggagtgatttccacagccaagcgcctggactac gagaccagttccagctatgttctaaaggtagaagcagactccatgaggttggcctcctcg aacctccgagctccctctaagactaatacagctaaggtggtgatcgatgtccaggacgag aacgaccactcgccggttttcaccacatctctttacatcggaggggttgcagaagatgct aaaaccttcacttccatcttgcaagtacaggcgctggaccgagacactggtaactacagt tctatcatgtaccggctgatcattcccccacctgctgggaaagacaccaaagacagcaaa gacggctttgtcatcgaaccgtacagcggcgtggtgaagacggcaatcatgtaccggaac atgaggaggtcatattttaagtttgaggtggttgctacagacaactatggtcacggacac agcagcaaggcagagatagtggtgtctgtcgtgaaccaactcgacatgcaagtggtcgta tcaaatgtccccccaacttatgtggagaaaaacaaagacaagctgctcagtattttggaa cgctacgtccaggagcagataccgggtgcaaaggttgtcgttgaaaccattggtccccat cgctatggtgatggaatggagcaggaagactacaccaagtcggacctcatgatttatgct atcgacccgctgacaaacagagctgtatctagtcaggagctctacaagtttctcgatggt aaactcttggacatcaataaagagttcaatccctttctccctcctggtggacggattttg gagatccgaacccccgaagtggtgaccagtgtaaagaaagctgtgcagactgtgggttac acagaaggggcgcttttggctctggcagttattatcattatctgctgtgtccccgccata ttgattgtcattatcacctacagacaattcaaagaacgccaggcagagtgtgccaaaaca gcccgtatccagatggcactgccaacaggcaaacctgggggaggcactgccaacaacctg tatgaagagctgggtgacaacgccatgcgtggatacggtcaacacgagacacaacaactt ctccgaccttctctgctcagaccagaggagttatcaatggaatctggcatcgaccccggt caggactactacacacaagattattacaactatgatcacggttatgagcttcctcaatac ggcagtcgcaggaagctgatctcaccctccggcctgtacgatgaatatggagaagttgtt gttgatgatgatggcagctactactacagcccacaggagtctgacggagagcacggcagc agaaaacgtcggatcaagttggtggtggaccgcgaatatgagaccagctccaccggtgag gacagcgtgccagagacccaacgcagccgcttaacctccaccctcaacagccatgctaat gttaacggcagcatctacatggcccagaatggctccatcatccgcacccgacgctcagtg aacaccacaggccccccacacacacacggcaacacgaacaacaacctgaaactcacctcc cctgtcttgagctcccggctggccaagcactttaaaaaactagacaaaatggctgccacg ctggaggaaagggttcccctgaacagccctagaacagatgttgggtgcaagacgctgcgc accttccaaagtccaggaatggccgcctctgccacagcctcttcccttctctctaacact gacaacaataaaacgccaaatgtgtttaatacgcgacaatccagcgtttctttaggttca accagcaccagcaacacgggcactgagagtgtggcatctaaattaaacctactcaaagcg gcgcactgtggaacagaccggccccagaaaccagcggagagagaggagctgaaagaaggc gagagagagtcgaaggtagacagcagtaacgacgaagacactgaagatggactcttaatg agggagacgttggagtgcccgagtgacagaacgcagtcggatgaggaggaactctggatg ggcccgtggaacagcctccacatacccatgaccaaactctga

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