Micropterus salmoides (largemouth bass): 119917056
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Entry
119917056 CDS
T07309
Symbol
tnfaip3
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04217
Necroptosis
msam04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119917056 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119917056 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119917056 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119917056 (tnfaip3)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119917056 (tnfaip3)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C64
119917056 (tnfaip3)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
119917056 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
LED_rpt
Motif
Other DBs
NCBI-GeneID:
119917056
NCBI-ProteinID:
XP_038593062
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAASGGLLHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELVQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQQQ
KERLLKDYMLLIDIPVIGLGYDATRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGA
RIEGVVQTKGGGVQGGVGVVGGSETEVSSRGARSSSPPSSSSGRGVSSPRSAPPTAPSLS
LYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNHGPPGAGTAATGLPGPNGGSTVPH
PAQGSGWTQWGGCEAETERCSMCRQEAFRIFNGLCPPCMQRQQAPERGEPQQNNPRTEAS
SSAWSQPREAERPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQTN
HHLTPPPAPVQSRHGLEAGFQNASRCRGPGCGAVGKAMLEGYCDKCYVKEQSTRLNQVAH
RTPHSPPLVMRDRAAKPRSSQQSQTQTQCRRSGCSNVSPGCTDLCPECHTRGQGREAGRR
AQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctcccaaaattcctgtttgtctccaacctgctgaaagcg
gtgaagatccgccagcgagtgcccaacgacgtggtgaagccggctgccagcggcggcctg
ctgcaccacctgcggggtatgcaccgttacacgctggagatgatcgccatgaaccacttt
ccgcaggccttcagggaggtggtgcaggctgccatcctggaccgagccatgcaggcctca
ttggagcaggagaagaagctcaactggtgtcgggaggtgaagaagatggtgcccttacgt
acaaatggagatgggaactgtttgctccacgcagcctctcagtacatgctgggtgttcaa
gacacagatctagtgcttcgaaaagccctccatggtgttttgaaagagacggacactggc
gtctttagagctcgcttccaggcagaactggtccagtcccaggagttcacccagactgga
ctccggtacaccaccatgaattgggaggaggagtgggaaaagattgtgaagatggcgtct
cctgtctccagtagcaacggcctccagtttgactctctggaggacattcacatcttcgtc
ctctctaacattctccgcagacccatcatcgtcatcgcagaccaggtggtcaggagtatg
aaatctggctcctccatctctcctctgaatgtgggtgggatttatctgccgctacactgg
cctcccacggagtgctacaaatacccaatagtgctcggctatgactcccagcactttgca
cccctcatcaccatcaaagacagtggtccagagatccgagcagtaccgctaatcaaccca
ggacgggggggctttgaggagctgaaggttcacttcctgatggagaaagaacagcagcag
aaagagaggcttctcaaagactacatgctattgatagacatccccgtcataggcttgggc
tacgatgccacacggatcatcaatgctgcacggctggatgaggggaacctccctgaagac
atgaacctgatggaggactacctgcagcttgtcaaccatgagtaccagcgatggcaggag
gacaaggagcaggcatgggccgcccagccgcaacgcccaccgcccttctccgtctcccag
ctctccctcattgagatccgttgtgccacaccacgatgcaccttctatgtctctgttgac
acacagcctcattgccatgagtgctttgagaagcgacaagccactactggtggaggagcg
aggatagaaggggtggtgcagaccaagggaggaggggtacagggtggggtaggagtggta
gggggatcagagactgaggtgagctccagaggagcccgaagtagcagccccccatcctct
tcgtctgggagaggggtgtccagcccccgctcagccccacctaccgctcccagcctcagc
ctgtacagtgaaactcatgccatgaagtgcaagacacctggctgcctctttacccttagc
gtggaacatgatggactttgtgagcgctgcttcaactccaggcagaaccatggaccccct
ggtgctggaacagctgctacaggactgccaggccccaatggggggtctacagttccccac
ccggcccagggctccggctggacccagtgggggggttgtgaggcagagacagagcgctgc
agcatgtgcagacaggaggcgttcaggatattcaatggcctgtgcccaccctgcatgcag
agacagcaggctccagagaggggagagccacagcagaacaaccccaggactgaggcttct
tcatcagcttggagccagcccagggaggctgagcggccatgcctcaccctaaccccaggg
cacacttcagcctggcaagcccctctggcccgcccttgtaaacgatctggctgccagttc
tttgggacgccagagaagttgggtttctgcactatttgctacgtagactatcagaccaac
caccacctgacccctccccctgccccggtccagagccggcatggtttggaggcaggcttc
cagaacgcctcacggtgtcgtgggcctgggtgtggtgcggtcggcaaggcaatgctggag
ggctactgcgacaagtgctacgtcaaagagcaaagcacacggctcaaccaagtggcacat
cgcacaccacactcccctcctctggtcatgcgtgaccgagcagccaaacccagatcttca
cagcaatcccagacccagactcagtgccggcgaagtggctgcagtaatgtgtccccaggt
tgcacagacctctgcccagagtgtcatacacgtggccagggtagagaggcgggcagacgg
gcgcaggcgcccaaagaaaagtccaagcagcggtgccggacgcagggctgcgaccactac
gccaaccaagagaaacagggctactgcaatgagtgcgaccacttcaaacagatttaccgc
ggctga
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